Gene Mkms_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1296 
Symbol 
ID4614309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1391227 
End bp1392246 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content67% 
IMG OID639790971 
Producthypothetical protein 
Protein accessionYP_937298 
Protein GI119867346 
COG category[L] Replication, recombination and repair 
COG ID[COG3569] Topoisomerase IB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.300668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.124585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTTC GGCGCAGCGT AGTCAGCGGC CCCGGCCTGA CCCGGGTGCG CCGCGGCAAG 
GGCTTCTCGT ACCGCGATGC GAACGGCGAC GCCGTCACCG ACAAGAAGAC GATCGACCGC
ATCAACTCCC TGGTGATCCC GCCGGCATGG AAGAAGGTGT GGATCTGCCC GTACCCCAAC
GGGCACATCC AGGCCGTCGG CACCGACGCC GCCGGACGGC GTCAGTACCT CTACCACCAG
AAGTGGCAGG AGGAACGCAA CGAGGAGAAG TTCGACCGGG TGCTGCAGAT GTCGTCCGCA
CTGCCCGAGA TGCGTCGGCA GATCGCCGCG GATCTGGGCG GCCGGGGCTG GCAGCGCAAC
CGGGTGCTGG CGCTGGCGCT GCACCTGCTC GATCTCGGCT ACTTCCGCGC CGGCGGCGAT
CAGTACGCCG AGGAGAACAA CTCGTTCGGC ATCGCGACGC TGCTGTGCGA ACACGTCAAG
CTGCAGCGCC AGGCCGTGGA GTTCGACTAT CCCGCCAAGA GCGGTGTCCA GCGCAGCCTG
GTGATCGACG ATCCTGAGGT GGTGAAGTCG GTGCGGGCGC TGCTGCGCCA TCCGGATCGA
CCGGACCGCC TGCTGGCGTG CCGAAATGGC GACGGGTGGG CCGAGATCCG CTCCGATGAC
CTCAACACCC GGTTCAAGGA GTTGGTGGGC GAGGACTACT CGGTGAAGGA TCTGCGCACC
TGGCACGGCA CCGTACTGGC GGCCGTCGCG TTCGTCGATG CCGACCCGCC GGTCAACAAG
ACGGTGATCA AACGCGTGGA GTCCGCGGTG ATGAAAGAGG TGTCAGGTTC GCTCGGCAAC
ACCCCCGCGG TGGCGCGGAC CTCCTATGTG GACCCGCGGG TGGTCAGCGC CTACGAATCG
GGGGCAACCA TCGCCGCCGC CGAACGCCGG GCACTACGTG CCAAACGTCC CGACGAACGT
CAGCTGATCC GCGAGCGGGC CACCGCGAAG CTGATCCGGC GGGCCGCCAA AAGTCGGTAG
 
Protein sequence
MRLRRSVVSG PGLTRVRRGK GFSYRDANGD AVTDKKTIDR INSLVIPPAW KKVWICPYPN 
GHIQAVGTDA AGRRQYLYHQ KWQEERNEEK FDRVLQMSSA LPEMRRQIAA DLGGRGWQRN
RVLALALHLL DLGYFRAGGD QYAEENNSFG IATLLCEHVK LQRQAVEFDY PAKSGVQRSL
VIDDPEVVKS VRALLRHPDR PDRLLACRNG DGWAEIRSDD LNTRFKELVG EDYSVKDLRT
WHGTVLAAVA FVDADPPVNK TVIKRVESAV MKEVSGSLGN TPAVARTSYV DPRVVSAYES
GATIAAAERR ALRAKRPDER QLIRERATAK LIRRAAKSR