Gene Mkms_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1047 
SymbolrplF 
ID4614568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1135369 
End bp1135908 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content65% 
IMG OID639790724 
Product50S ribosomal protein L6 
Protein accessionYP_937051 
Protein GI119867099 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000313329 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.196922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTA TTGGAAAGCA GCCGGTTCCG GTTCCCGCCG GAGTCGATGT GACGATCGAA 
GGTCAGAACG TATCGGTGAA GGGGCCCAAG GGCACTCTGT CGCTGGCGGT CGCCGAGCCG
ATCGTCGTGG CGCGTGATGA CGAGGGCGCC ATCGTGGTGA CCCGGCCCAA CGACGAGCGG
CGCAACCGCT CGCTGCACGG GCTGTCCCGC ACCCTGGTGG CCAACCTGGT CGAGGGCGTC
ACGCAGGGAT ACACCACCAA GATGGAGATC TACGGCGTCG GTTACCGCGT CGCGCTCAAG
GGTTCCAACC TGGAGTTCGC GCTCGGTTAC AGCCACCCCG TGGTCATCGA GCCGCCGGAG
GGCATCACCT TCGCGGTCGA GACGCCCACG AAGTTCTCGG TCTCGGGTAT CGACAAGCAG
AAGGTCGGCC AGATCTCGGC GATCATCCGC CGTCTGCGCC GCCCCGACCC GTACAAGGGC
AAGGGCGTGC GTTACGAGGG TGAGCAGATC CGCCGCAAGG TCGGAAAGAC AGGTAAGTAA
 
Protein sequence
MSRIGKQPVP VPAGVDVTIE GQNVSVKGPK GTLSLAVAEP IVVARDDEGA IVVTRPNDER 
RNRSLHGLSR TLVANLVEGV TQGYTTKMEI YGVGYRVALK GSNLEFALGY SHPVVIEPPE
GITFAVETPT KFSVSGIDKQ KVGQISAIIR RLRRPDPYKG KGVRYEGEQI RRKVGKTGK