Gene Mkms_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1025 
Symbol 
ID4614689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand+ 
Start bp1119175 
End bp1119819 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content71% 
IMG OID639790702 
ProductTetR family transcriptional regulator 
Protein accessionYP_937029 
Protein GI119867077 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.589531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.553747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CGAATGGCGA TCCCAGACCG GCCCGCTCGC GCGCCCGGCT ACTCGACGCA 
GCGACCATGC TGCTGCGGTC CGGCGGCCCC GGCGCGGTGA CGATCGATGC GGTCACCCGC 
AGCGCCAACG TCGCCCGGGC CACCCTCTAC CGGCATTTCC CCAGCGCCAA CGATCTGCTC 
GCCGCCGCCT TCCAGAGCCT GCTGCAACCC GCCCCGATGC CGCCGGCCGA GGGCAGCCTG 
CGCGATCAGC TCATCGCCGT CGTGGTCGGC TGGGCCGATC CCATCTCAGA GGCGCCCACC 
ACGCTCGCCG CCATGACGTG GCTCGCGTCC GGACCGGACC TCGGCCCATG GGCCGAGGCA 
CGCGATCCCG ACGCGGGAAG TTCGGTCGCC TCCCTGCGCG AGCGCATCCT GCAGTCCTAC 
TCGGCGCCGT TCGAGGCGAT CTTCGACGGT GCCCAGGCCG CCGAACTCGG CCTCACCGAC 
GTCGACCGGA TCCAGGCCAT CGCGCTGCTC ATCGGTCCAC TGATCCTCGG CCGGCTGAGC 
ACCCTGGCCG ATTTCGACTA TCACGCCTGC GCGGAGGCCG CCGTGGACGG ATTCCTGGCG 
ACCCACACCG TCAGCGCAAC GAGTACCGAA TCGGCAGGTG CTTGA
 
Protein sequence
MTATNGDPRP ARSRARLLDA ATMLLRSGGP GAVTIDAVTR SANVARATLY RHFPSANDLL 
AAAFQSLLQP APMPPAEGSL RDQLIAVVVG WADPISEAPT TLAAMTWLAS GPDLGPWAEA 
RDPDAGSSVA SLRERILQSY SAPFEAIFDG AQAAELGLTD VDRIQAIALL IGPLILGRLS 
TLADFDYHAC AEAAVDGFLA THTVSATSTE SAGA