Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_0964 |
Symbol | |
ID | 4614628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 1050432 |
End bp | 1051925 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639790641 |
Product | lipopolysaccharide biosynthesis |
Protein accession | YP_936968 |
Protein GI | 119867016 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0489] ATPases involved in chromosome partitioning [COG3944] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.722103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.488282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACCTGC GAGAGTTTGT CAGACTGCTG CGTGCGCGTT GGATGGCCGT GTGCGTGACA ACGCTAATCA CGTTTCTCGG CGCAGTTGCG GTCACGATGC TTACAACCCC GCTATACCAG TCCTCGACTC GACTGTTTGT ATCCACTACG TCGGGTTCCA CTTTGGCCGA TACTTACCAG GGTAATCGGT TCTCCCAAGA ACGCGTGATC TCGTACGCCG AATTGTTGAT GGGCGAAACC CTGGCCCAAC GCACAATTGA CAAGCTCGGC CTCGATATGA CCGCTCAAGC TCTACAAGAG AACGTCAAGG CGGGCGCGAA GCCCGATACT GTGTTAATTG ATGTGGCCGT CCTCGATCAA TCGCCTGTAC GGGCGCGCGA CATCGCAAAC ACGTTATCGG ATGAGTTCGT CGCTATGGTC CGCGAGTTGG AAACCCCAGA AGACGGATCG AGCCCGGACG CGCGCGTAGT CGTCGAGCAG CGTGCGTCGA TTGCAAACAA GCCAGTGATT CCCAAAACCG CACGAAACAT CGTGTTCGGC TTGGGGCTAG GGTTGTTGTT GGGTGTCGGT CTAGCCGTCC TCCGCGATAC GCTCGACAAC ACCGTCAAAG ATCGACAAGC CCTCGAAGAC GTAACTGGCG CGGGTGTTGT CGGCAACATC CCCCTCAGCA AGGACCGGCG GAAGCAGGCA GCGATAGGGT TCGAAAGCGA CAACTCCGGC ATCGCGGAAG CCTTTCGGAA ACTCCGGACC AACCTGCAGT TCTTGGCAGT TGACAATCCC CCGCGTGTCA TTGTGCTTAC TAGTTCGGTG CCGCACGAAG GAAAGTCCAC CACGGCAATC AACATCGCCC TGGCATTGGC AGAAGCCGAG CACAACGTGG TCCTGGTTGA TGGCGACATG CGGCGCCCAA TGTTGCACAA GTATCTCGGC TTGGTCGGAC CGGTAGGATT CAGCACCGTA CTAAGTGGGG GAGCATCACT TTCGGAAGCC CTGCAAAATA CGCGATTCCC AGGGCTCACT GTTCTCACCT CTGGGGCGAT TCCGCCGAAT CCAAGCGAAC TGCTGGGTTC ACAGTCGGCC CGAAGGTTGC TCAACGAGCT ACGTGCCCAG TTCGATTATG TCATCGTCGA TTCCACCCCA CTGCTTGCCG TGACCGATGC CGCGATCCTG GCCGCTGGAG CCGACGGTGT GCTTATCATG GCACGATTCG GGCACACAAC CCATGAACAA CTCACACACG CGGTTGGAAG TCTCGAAAGT GTCGGAGCGG CCCTCCTCGG GGCCGTGTTC ACAATGATCC CGACCCGCAA CAATGCGTCG TACAGTTACG GATATTACGG CTACGGCGAA GAGGCCACGG GGCAACAAGC ACGTCACGGG CTGCCGACTG AAACGCGGGT GGAGAAATCC TCACCGTCGA GCGCAACCTC GGCGCAGGGC GATTCAGAAG TCGCTGAGCC GGCTGGCACC CGACAAACGC GAGAGACCGA CTAG
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Protein sequence | MNLREFVRLL RARWMAVCVT TLITFLGAVA VTMLTTPLYQ SSTRLFVSTT SGSTLADTYQ GNRFSQERVI SYAELLMGET LAQRTIDKLG LDMTAQALQE NVKAGAKPDT VLIDVAVLDQ SPVRARDIAN TLSDEFVAMV RELETPEDGS SPDARVVVEQ RASIANKPVI PKTARNIVFG LGLGLLLGVG LAVLRDTLDN TVKDRQALED VTGAGVVGNI PLSKDRRKQA AIGFESDNSG IAEAFRKLRT NLQFLAVDNP PRVIVLTSSV PHEGKSTTAI NIALALAEAE HNVVLVDGDM RRPMLHKYLG LVGPVGFSTV LSGGASLSEA LQNTRFPGLT VLTSGAIPPN PSELLGSQSA RRLLNELRAQ FDYVIVDSTP LLAVTDAAIL AAGADGVLIM ARFGHTTHEQ LTHAVGSLES VGAALLGAVF TMIPTRNNAS YSYGYYGYGE EATGQQARHG LPTETRVEKS SPSSATSAQG DSEVAEPAGT RQTRETD
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