Gene Mkms_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0964 
Symbol 
ID4614628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1050432 
End bp1051925 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content58% 
IMG OID639790641 
Productlipopolysaccharide biosynthesis 
Protein accessionYP_936968 
Protein GI119867016 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3944] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.722103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.488282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCTGC GAGAGTTTGT CAGACTGCTG CGTGCGCGTT GGATGGCCGT GTGCGTGACA 
ACGCTAATCA CGTTTCTCGG CGCAGTTGCG GTCACGATGC TTACAACCCC GCTATACCAG
TCCTCGACTC GACTGTTTGT ATCCACTACG TCGGGTTCCA CTTTGGCCGA TACTTACCAG
GGTAATCGGT TCTCCCAAGA ACGCGTGATC TCGTACGCCG AATTGTTGAT GGGCGAAACC
CTGGCCCAAC GCACAATTGA CAAGCTCGGC CTCGATATGA CCGCTCAAGC TCTACAAGAG
AACGTCAAGG CGGGCGCGAA GCCCGATACT GTGTTAATTG ATGTGGCCGT CCTCGATCAA
TCGCCTGTAC GGGCGCGCGA CATCGCAAAC ACGTTATCGG ATGAGTTCGT CGCTATGGTC
CGCGAGTTGG AAACCCCAGA AGACGGATCG AGCCCGGACG CGCGCGTAGT CGTCGAGCAG
CGTGCGTCGA TTGCAAACAA GCCAGTGATT CCCAAAACCG CACGAAACAT CGTGTTCGGC
TTGGGGCTAG GGTTGTTGTT GGGTGTCGGT CTAGCCGTCC TCCGCGATAC GCTCGACAAC
ACCGTCAAAG ATCGACAAGC CCTCGAAGAC GTAACTGGCG CGGGTGTTGT CGGCAACATC
CCCCTCAGCA AGGACCGGCG GAAGCAGGCA GCGATAGGGT TCGAAAGCGA CAACTCCGGC
ATCGCGGAAG CCTTTCGGAA ACTCCGGACC AACCTGCAGT TCTTGGCAGT TGACAATCCC
CCGCGTGTCA TTGTGCTTAC TAGTTCGGTG CCGCACGAAG GAAAGTCCAC CACGGCAATC
AACATCGCCC TGGCATTGGC AGAAGCCGAG CACAACGTGG TCCTGGTTGA TGGCGACATG
CGGCGCCCAA TGTTGCACAA GTATCTCGGC TTGGTCGGAC CGGTAGGATT CAGCACCGTA
CTAAGTGGGG GAGCATCACT TTCGGAAGCC CTGCAAAATA CGCGATTCCC AGGGCTCACT
GTTCTCACCT CTGGGGCGAT TCCGCCGAAT CCAAGCGAAC TGCTGGGTTC ACAGTCGGCC
CGAAGGTTGC TCAACGAGCT ACGTGCCCAG TTCGATTATG TCATCGTCGA TTCCACCCCA
CTGCTTGCCG TGACCGATGC CGCGATCCTG GCCGCTGGAG CCGACGGTGT GCTTATCATG
GCACGATTCG GGCACACAAC CCATGAACAA CTCACACACG CGGTTGGAAG TCTCGAAAGT
GTCGGAGCGG CCCTCCTCGG GGCCGTGTTC ACAATGATCC CGACCCGCAA CAATGCGTCG
TACAGTTACG GATATTACGG CTACGGCGAA GAGGCCACGG GGCAACAAGC ACGTCACGGG
CTGCCGACTG AAACGCGGGT GGAGAAATCC TCACCGTCGA GCGCAACCTC GGCGCAGGGC
GATTCAGAAG TCGCTGAGCC GGCTGGCACC CGACAAACGC GAGAGACCGA CTAG
 
Protein sequence
MNLREFVRLL RARWMAVCVT TLITFLGAVA VTMLTTPLYQ SSTRLFVSTT SGSTLADTYQ 
GNRFSQERVI SYAELLMGET LAQRTIDKLG LDMTAQALQE NVKAGAKPDT VLIDVAVLDQ
SPVRARDIAN TLSDEFVAMV RELETPEDGS SPDARVVVEQ RASIANKPVI PKTARNIVFG
LGLGLLLGVG LAVLRDTLDN TVKDRQALED VTGAGVVGNI PLSKDRRKQA AIGFESDNSG
IAEAFRKLRT NLQFLAVDNP PRVIVLTSSV PHEGKSTTAI NIALALAEAE HNVVLVDGDM
RRPMLHKYLG LVGPVGFSTV LSGGASLSEA LQNTRFPGLT VLTSGAIPPN PSELLGSQSA
RRLLNELRAQ FDYVIVDSTP LLAVTDAAIL AAGADGVLIM ARFGHTTHEQ LTHAVGSLES
VGAALLGAVF TMIPTRNNAS YSYGYYGYGE EATGQQARHG LPTETRVEKS SPSSATSAQG
DSEVAEPAGT RQTRETD