Gene Mkms_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0900 
Symbol 
ID4614741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp981620 
End bp982972 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content69% 
IMG OID639790574 
Productextracellular solute-binding protein 
Protein accessionYP_936904 
Protein GI119866952 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCCTC CTGCCTTCAC GCGTCGACGC GCCCTGCAAC TGCTCGGCCT CGCCGGTGGC 
GCAGCGCTTC TCGGACCCGC CCTGGCCGCC TGCGGTACCT CCGGCGGCGG CGGCGCACTG
TCGGCCGAGA CCCCGGTGGC CGGGCGGTTC GAGGGCGTCA CCCTCAAACT GCTCGTCAAC
CAACCGCACG TGACGTCGTT CCGCGACGTG CTCGCCCCGG CCTGGCAGCA GGCCACCGGC
GGCGCCCTCG ACGTCACCGC CGCGCCTTAC GATCAGCTGA CCAGCAAGCA GATCCTCGAC
GTGCAGAGCG GCACAGGCGA ATTCGACGTC TTCGACTACT TCTACTTCGG CCTCGGCGAC
CTCGTCGACG CCGGTGCGCT CACCGACCTC ACCGACTGGA TCGACGCCAA ACAGTCCGAC
CTCGACGTCC CCGGCTACCT GAAGTCGATC TACGACCCGT ACACCCTGCT CGACGGCCGC
CGCTACGGAC TGCCCTATGA CGGCGACATC CACATCCTGT TCTACAACGC CGAACTGCTC
GACCGGTACA AGGTGGCGCC GCCGACGACC TGGGACGAGT ACGACGAGGT GGCCGCGAAG
ATCACCCGGG ACGCGCGCGG GGCGGCATAC GGCGCCATCG TCTCCGGTCA GCAGGTGCCG
ATGATCCTCG GCTGCTCCTA CATCAACCGG CTCACCGGCT ACGGCGGAAA CCTGTTGGAC
GCCAACGGCA AACCGCAGCT GACCTCCGAT GCCTCGGTGG CGGCGTTGAA GCATCTGGTC
GCCGTCGCCC CGAACGCCCT GCCGACCCCG CTGCAGGTCG GCTTCGACCA GGCCAACACC
GCGTTCCTCA CCGGACAGGG CGCGCTGCTC GACACCTGGA CCGATATGGC GTTGCGTGCC
GAGGATCCGA CGGCGTCGAA GATCGCCGGC CGCTGGGGTG CGGTGTCGCT GCCCGTCGGT
GGCGCCAACA CCACCCCGCG CACCGCGCTG GACGCCGGTT TTGGGCTGGG CATCTCGACG
GCGTCGAAGA ATGTCGATGC CGCCGCCGCA TTCATCGCGT GGGCGACCGC TGCTCCGCAG
AACCTGAAGG TGTCGTCGAC CGCCGGCGCG GGTATCGACC CGGTGCGCGG TGAGGTGCTC
AACTCCGACG GTTACGCGAA GGTCGTCACC GCGGCCGTCG ACCCGATCCG CGAAGGCCTC
GACGGCGATC CGCTGGTGTG GCCGAAGCAG GCCGGCGCCC CGAAGTTGTT GCAGGACCTC
GTCGATCAGC TCGCCCTGGC GATCGCCGGT ACCCAGACCG TCGAGCAGTC GCTGGAGAAC
GCCCAGGCCA GCTGGGACAG CGCCACGCAA TGA
 
Protein sequence
MTPPAFTRRR ALQLLGLAGG AALLGPALAA CGTSGGGGAL SAETPVAGRF EGVTLKLLVN 
QPHVTSFRDV LAPAWQQATG GALDVTAAPY DQLTSKQILD VQSGTGEFDV FDYFYFGLGD
LVDAGALTDL TDWIDAKQSD LDVPGYLKSI YDPYTLLDGR RYGLPYDGDI HILFYNAELL
DRYKVAPPTT WDEYDEVAAK ITRDARGAAY GAIVSGQQVP MILGCSYINR LTGYGGNLLD
ANGKPQLTSD ASVAALKHLV AVAPNALPTP LQVGFDQANT AFLTGQGALL DTWTDMALRA
EDPTASKIAG RWGAVSLPVG GANTTPRTAL DAGFGLGIST ASKNVDAAAA FIAWATAAPQ
NLKVSSTAGA GIDPVRGEVL NSDGYAKVVT AAVDPIREGL DGDPLVWPKQ AGAPKLLQDL
VDQLALAIAG TQTVEQSLEN AQASWDSATQ