Gene Mkms_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0880 
Symbol 
ID4614721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp960766 
End bp964128 
Gene Length3363 bp 
Protein Length1120 aa 
Translation table11 
GC content68% 
IMG OID639790554 
Producthypothetical protein 
Protein accessionYP_936884 
Protein GI119866932 
COG category[S] Function unknown 
COG ID[COG4913] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGAAC AGTTTCACCT GTCGCGGCTG CAGGTCATCA ACTGGGGCGT GTTCGACGGC 
TACCACTCGA TCCCGTTCAG CGCCGGCGGC GCCCTGATCG CCGGCGCCTC CGGCAGCGGC
AAATCGTCTC TGCTGGATGC GATCTCGCTC GGCTTCCTGC CGTTCAACCG CCGCAACTTC
AACGCCTCCG GTGACAACAC CGCGGCCGGG TCGAGCGCGG GACGGCGCAC CGTGGACAAG
TACGTGCGCG GCGCGTGGGG CCAGCGCAGC GACGGCGGTA CCAGCCGGGT GATGTACCTG
CGCGGCGACG GCACCGCCTG GTCGGCGGTC GCGGTCACCT ACGCCGGCGA CTCCGGGCGC
ACCGTGACCG GTCTGGTGCT CAAGTGGCTG ACCGGCGAGT CCCGGTCGGA TTCGTCGAGC
CGGTTCGTAC TCAGCGACGG CGACCTCGAC ATCGAGGACG TCTGCAACCG TTGGGCGGCG
GGACGTTTCG ACACCGGTGT GTTCAAAGCA GACGGCTGGC GGTTCACCAC GAAGGTCGAG
TCGCAGTACC TGGCGCAGCT GTACGCGACG ATCGGTATCC GCGCCTCCGA CGCCGCCCAG
CAGCTGCTCG GCAAGGCGAA GTCATTGAAA AGCGTCGGCG GGCTGGAACA GTTCGTCCGC
GAGTTCATGC TCGACGAACC CGACAGCCTG GCGCGGCTGC CCGAGGCGCT CAAGCAGATC
GACCCGCTGG TGGAGGCCCG CGAACTGCTG GCGGTCGCGC AGCGCAAACG CAAGATCCTC
GGCGACATCG AGAAGATCCA GCAGCGCTAC GCCTCGGAGT CCTCGGATCT GGGCATCATC
GACCTGGTCG ACCTGCCGAT GGTGCGGGCC TACACCGACC ACGTCCGGCT GGCGCAGTGC
CCGACGCAGA TCGCCCAGCT CGACACCACG ATCGACCAGC TCGACAACGA GTACGAGGAC
GTCACCCGTT CGCTGAATCT GGCCAAGGCC GAGGCGGATT CGCTCAACGC GCAGATCAGC
GGGAACAGCG CCAGCATCGG ACCGCTGCAG TCGCAGGTGA CCGCCGCCGA GACCGAGGCC
GAGCAGGTGT CACGCCGGCG CAGCGCCTAC GAGGACATGG TGACCGCACA GGGCCTCGAC
GTCCCGGACA CCGCCGACGA GTTCTGGAAC CTGCGCGAGG AGTTGCTCAC CGAGGCCACC
GAACTGCTCG CCAAGGTCGA GCGCAACCGC GAGGCGTCCA CCGACGCGGA GTACGCGCAG
AAGGCGGCGC GCATCGCCCG CGACGATGCG GCCAAGGAAC TCAAGCGCGT CGAGCACGTG
GGGTCGGCGC TGCCGGAGTT CGCGCTGCTG ATGCGCGACC AGATCTGCGC GGCGATCGGT
GTCGACGCGG GTGAGTTGCC GTACGTCGCC GAGCTGATGG ACCTGCGGCC GAATCAGACG
CGCTGGCGGA TCGCGGTCGA GAAGGTGCTG CGCGGGGCGG GGCTGCGGCT GCTGGTGCCC
GACCAGCACT GGACCAAGGT CCTGAAGTTC GTCAACGAGA CGAACATGCG CGGCCGGCTC
GCGCTGCACC ACGTGCGGGC CAGAGTCTAC GGCGCCGAAC CGGTGGAACC CGAACCGAAC
ACGTTGGCGG GCAAGCTGTT CGCCGTCGAC CCGAGCCATC CGTGCGCGGC CGAGGCCGTC
GATGTCGTCA CGGGCGCCGG TGACCACGTC TGCGTCGACA CCCCCGAGGT GTTCGCGCGG
TTCCGCCGGG CGGTCACCGA CACCGGCCTG TACAAGGACT CCGACCGGTT GGCGATCAAG
GACGACCGCC GCCCGCTGAA GCAGTCCGAG TACCTGTACC AGGGTGACGT GTCGGCGAAG
ATCAACGCCT TGACCGTCGA CCTGGCCGCC GCCGAGGAGG CCTACCAGAA GGCCCGCCGG
GTCGCCGACG AGATCGCCGC GCAGCGTCAG CAGTGGCGCG ACCGGGCGGC GGCGTGCAAG
GCGATCTGCG AGCAGTTCCC GCAGTGGAGC CAGATCGACG TCGAGACCGC CGACGGTCAC
GCCGACCGGC TGCGCGAACA GTACGAGCTG TTGCTCGCCG ACCATCCCGA CATCGAGGCG
CTCAACGCGC GCGCCGACGA ATGCTGGTCG CAAATTCAGG TGTTGATGAC GCGGCGGGGT
GCGATCCAGA CCCGTCGCGA CGATCTGGAC TCCCGTCGCA CCCAACTGTT GGAGCTGCAG
GAACGTCTGC AGCCTGCGTT CGTGTCGGAG CCGTTGACCG AGCTGCTGCA CCGCTACGCC
GGACAGGTGC CGGTGACGCT CGAGCTGCTC GGCCCGGAAC CGCACCGCGA TGCGCTGTTC
GCCGCGATCA AGAAGGAGCG CGAGCAGCTG CGCGAGAGCC GGCGTCGCTC GTATGACGAA
CTGGCCCGCA TCCTCAACAC GTTCGACACC GCGTTCCCGG ACGCAATCCC GAACGACAGC
ACCAACTTCG ACGAGCGGGT GCACGACTAC GTGGCGCTGT GCCGGCACAT CGACGAACGT
GAGTTGCCCG AGGCCTACGA GCGGATGATG CGGTTGGTGA CCGAGCAGGC GCCGGATGCG
ATCCTGACGC TGCACCGGGT CGCCGAGCAG GAGGCGCGGC GCATCGCCGA GCAGATCGAA
CGGGTCAACA CCGGCCTGGG TGCGGTGGAG TTCAACCGCG GCACCCGATT GACGCTGCGG
GCCACACCGC GCCAGTTGAC GGCGGTGTCG GAGCTGACGG AGATCGTGCG GTCGATCTCG
CGGCGCATCG CCGAGGTCGG CCTGGGCGAC AAGCAGGCGA TCCTCGACCA GTACGCCGAC
ATCCTCCGGT TGCGCAACCG GTTGGCGTCG ACGGCGCCGG AGGACAAGGC TTGGACGCGC
GATGCGCTCG ATGTGCGCAA CAGGTTCACC TTCGACTGCG CGGAATGGGA TGTGGCCACC
GAGGAGTTGA TCCGCACGCA TTCCAACGCC GGCGACAACT CCGGAGGCGA GCAGGAGAAG
CTGATGGCGT TCTGCCTGGC GGGCGCGCTG AGCTTCAACC TGGCCAGCCC CGACAGTACG
GACAACAGGC CGGTTTTCGC GCAGCTGATG CTCGACGAGG CGTTCTCCAA ATCCGATCCG
CAGTTCGCCC AACAGGCGCT GTCGGCGTTC CGCAAGTTCG GCTTCCAGCT GGTGATCGTG
GCGACAGTGC AGAACGCGAC GACGATTCAG CCCTACATCG ACAGCGTGGT CATGGTGTCG
AAGACGGAGG CGACGGGCCG CAACGCCCGC CCCGTGGCCA CGGTGGCGAC GCGGACGATC
TCGGAGTTCG GCGAGCTGCG CCGGGAGATG CGGGCGAACG CGAAGGTCCC CGCCGGGGTC
TGA
 
Protein sequence
MTEQFHLSRL QVINWGVFDG YHSIPFSAGG ALIAGASGSG KSSLLDAISL GFLPFNRRNF 
NASGDNTAAG SSAGRRTVDK YVRGAWGQRS DGGTSRVMYL RGDGTAWSAV AVTYAGDSGR
TVTGLVLKWL TGESRSDSSS RFVLSDGDLD IEDVCNRWAA GRFDTGVFKA DGWRFTTKVE
SQYLAQLYAT IGIRASDAAQ QLLGKAKSLK SVGGLEQFVR EFMLDEPDSL ARLPEALKQI
DPLVEARELL AVAQRKRKIL GDIEKIQQRY ASESSDLGII DLVDLPMVRA YTDHVRLAQC
PTQIAQLDTT IDQLDNEYED VTRSLNLAKA EADSLNAQIS GNSASIGPLQ SQVTAAETEA
EQVSRRRSAY EDMVTAQGLD VPDTADEFWN LREELLTEAT ELLAKVERNR EASTDAEYAQ
KAARIARDDA AKELKRVEHV GSALPEFALL MRDQICAAIG VDAGELPYVA ELMDLRPNQT
RWRIAVEKVL RGAGLRLLVP DQHWTKVLKF VNETNMRGRL ALHHVRARVY GAEPVEPEPN
TLAGKLFAVD PSHPCAAEAV DVVTGAGDHV CVDTPEVFAR FRRAVTDTGL YKDSDRLAIK
DDRRPLKQSE YLYQGDVSAK INALTVDLAA AEEAYQKARR VADEIAAQRQ QWRDRAAACK
AICEQFPQWS QIDVETADGH ADRLREQYEL LLADHPDIEA LNARADECWS QIQVLMTRRG
AIQTRRDDLD SRRTQLLELQ ERLQPAFVSE PLTELLHRYA GQVPVTLELL GPEPHRDALF
AAIKKEREQL RESRRRSYDE LARILNTFDT AFPDAIPNDS TNFDERVHDY VALCRHIDER
ELPEAYERMM RLVTEQAPDA ILTLHRVAEQ EARRIAEQIE RVNTGLGAVE FNRGTRLTLR
ATPRQLTAVS ELTEIVRSIS RRIAEVGLGD KQAILDQYAD ILRLRNRLAS TAPEDKAWTR
DALDVRNRFT FDCAEWDVAT EELIRTHSNA GDNSGGEQEK LMAFCLAGAL SFNLASPDST
DNRPVFAQLM LDEAFSKSDP QFAQQALSAF RKFGFQLVIV ATVQNATTIQ PYIDSVVMVS
KTEATGRNAR PVATVATRTI SEFGELRREM RANAKVPAGV