Gene Mkms_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0313 
Symbol 
ID4615369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp348107 
End bp348895 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content68% 
IMG OID639789988 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_936320 
Protein GI119866368 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.19239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATCA CCGACAGGGT GTTCGTCGTG ACCGGTGCCG GTAACGGTAT GGGCCGGCAG 
GTGACGCTCG ACCTCCTGCG CCGGGGTGCG CTGGTCGCGG CGGCCGACGT CGACGAAGTG
GGACTGACCG GCACGGCACG GCTCGCGATG GCCGGGACCC GGCTGTCCAC CCACGTTCTC
GACGTCACGG ACAGGGACGC GGTCGCCGCC ATGCCGGGCC GGGTGGTCGA CGTCCACGGC
CGGGTCGACG GGCTGGTCAA CATCGCCGGC GTCATCCACC GGTTCGCGCC GTTCATCGAC
CTGCCCCCGG AGACGGCCGA TCGCATCATG GCCGTCAACT TCACCGGCAC GGTCGACATG
TGCCGCGCGT TCCTGCCCGT CCTCCTGGCC CGCCCGGAGG CGAACCTGAC GAACATGTCG
AGCCTGTCGG CGTTGCTGCC CTTCGCCAGC CAGACGCTGT ACAGCGCCAG CAAGGGCGCG
GTCAAACAGT TCAGCGAAGG CCTCTACGCC GAGCTGTGCG ATACGAATGT CCATGTGGTG
ACGGTCTTTC CGGGCAACGT CGCCACGGAG CTGACCAGTA ACTCGGGTGT CGAGATGCTC
GACGCCGGCG GTAAGAAGGT CCGGTCCACC ACGCCGGAGG CGGCGGGCCG CAAGATCGTC
GACGGCATCG CCGAGGACCG TTTCCGGGTA CTCATCGGTG CCGACGCACA CAGCCTCGAC
GTGCTGGCGC GGGTGTCGGC GAAACGCACC ACCAGGTTGG TCGCCAAACA GATCAAGTCG
GTGCTGTGA
 
Protein sequence
MRITDRVFVV TGAGNGMGRQ VTLDLLRRGA LVAAADVDEV GLTGTARLAM AGTRLSTHVL 
DVTDRDAVAA MPGRVVDVHG RVDGLVNIAG VIHRFAPFID LPPETADRIM AVNFTGTVDM
CRAFLPVLLA RPEANLTNMS SLSALLPFAS QTLYSASKGA VKQFSEGLYA ELCDTNVHVV
TVFPGNVATE LTSNSGVEML DAGGKKVRST TPEAAGRKIV DGIAEDRFRV LIGADAHSLD
VLARVSAKRT TRLVAKQIKS VL