Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_0263 |
Symbol | sdhA |
ID | 4615319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 300290 |
End bp | 302236 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639789938 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_936270 |
Protein GI | 119866318 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.115771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCGA GCGACCCCCG ACCCGGCGAC TCCAGCGGTA TCGAGAGACA CCAGTACGAC GTGGTGGTCA TCGGTGCCGG CGGCGCGGGT CTGCGAGCAG TGATCGAAGC ACGCGAACGC GGCCTGAAGG TCGCCGTGGT GTGCAAATCG CTGTTCGGCA AGGCGCACAC GGTGATGGCC GAGGGCGGCT GCGCCGCATC GATGGGCAAT ACGAACCCGA AGGACAACTG GCAGGTCCAC TTCGGCGACA CCATGCGTGG CGGCAAATTC CTCAACAACT GGCGGATGGC CGAGTTGCAC GCCAAGGAGG CGCCCGACCG GGTGTGGGAA CTGGAGACCT ACGGCGCGCT GTTCGACCGC ACCAAGGACG GCCGGATCAG CCAGCGCAAC TTCGGCGGTC ACACCTATCC GCGGCTGGCC CACGTCGGTG ACCGCACCGG CCTGGAGATC ATCCGCACCA TGCAGCAGAA GATCGTCTCG CTGCAGCAGG AGGACAAGGA GGAACTCGGC GACTACGAGG CCCGCATCCG GGTGTTCGCC GAGTGCACCG TCACCGATCT GATCAAAGAC GGGGATCGGA TCGCGGGAGC CTTCGGCTAC TGGCGTGAGA GCGGCAGCTT CATCCTCTTC GACGCACCCG CGGTCGTGCT CGCCACGGGC GGAATCGGCA AGTCCTACAA GGTCACCTCG AACTCGTGGG AGTACACCGG CGACGGACAC GCCCTGGCGC TGCGGGCCGG CGCGACGCTG ATCAACATGG AGTTCATCCA GTTCCACCCC ACCGGCATGG TGTGGCCGCC CAGCGTGAAG GGCATCCTCG TCACCGAGGG TGTGCGCGGT GACGGCGGTG TGCTGAAGAA CTCCGACGGC AAGCGGTTCA TGTTCGACTA CATCCCCGAC GTGTTCAAGG GCCAGTACGC CGAGTCCGAG GACGAGGCCG ACCAGTGGCT CAAGGACAAC GACTCCGCGC GCCGCACCCC CGACCTGCTG CCCCGCGACG AGGTGGCCCG CGCGATCAAC ACCGAGGTGA AGGAAGGTCG CGGCACCCCG CACGGCGGCG TCTACCTCGA CATCGCGTCG CGCATGAGCT CCGAGGAGAT CAAGCGGCGG CTGCCGTCGA TGTACCACCA GTTCATGGAG CTCGCCGAGG TCGACATCAC CACCGACGAG ATGGAGGTCG GGCCCACCTG CCACTACGTG ATGGGTGGCA TCGAGGTCGA CCCGGACACC GGCGCCGCCA AGACGCCGGG CCTGTTCGCC GCCGGCGAGT GCGCCGGCGG TATGCACGGG TCGAACCGGT TGGGCGGCAA CTCGCTGTCG GACCTGCTGG TCTTCGGCCG CCGTGCCGGA CTGGGCGCCT CGGACTACGT ACGTGCCCTC GGCAACCGGC CGACGGTGTC GGAGGAGGCC GTCGAGGCGG CGCTCAAACT GGCGCTCGCC CCCTTTGACG GGCCGAGCGA GGGTCAACCG GAGAACCCCT ACACCATGCA GCTCGACCTG CAGGACACGA TGAACGAGCT GGTCGGGATC ATCCGCAAGG CCGACGAGAT CATCGAGGCC CAGGGAAAAC TCGACGAACT GCGCGATCGG TTCAAGCGCA TGAAGGTCGA GGGCAACCGG CACTTCAACC CCGGCTGGCA CCTCGCGATC GACCTGCGCA ACATGCTGCT GGTCAGCGAG TGCGTGGCCA AGGCGGCGCT GGAACGCACC GAGAGCCGCG GCGGCCACAC CCGCGACGAC TACCCGTCGA TGGAAGCGGA GTGGCGCAGA ACGCTGCTGG TGTGCCGGGC CCAGGGGGAC GACGTCGTCG TCCCGAGCGT CACCGTCACC CGCGAGGACC AGGTGCCGAT GCGCGACGAC CTGCTCGAGC TGCTGGACAT CGAAGAACTC CAGAAGTACT ACACCGACGA GGAACTCGCC AACCACCCGG CAAGGAGGGG CTCATGA
|
Protein sequence | MAASDPRPGD SSGIERHQYD VVVIGAGGAG LRAVIEARER GLKVAVVCKS LFGKAHTVMA EGGCAASMGN TNPKDNWQVH FGDTMRGGKF LNNWRMAELH AKEAPDRVWE LETYGALFDR TKDGRISQRN FGGHTYPRLA HVGDRTGLEI IRTMQQKIVS LQQEDKEELG DYEARIRVFA ECTVTDLIKD GDRIAGAFGY WRESGSFILF DAPAVVLATG GIGKSYKVTS NSWEYTGDGH ALALRAGATL INMEFIQFHP TGMVWPPSVK GILVTEGVRG DGGVLKNSDG KRFMFDYIPD VFKGQYAESE DEADQWLKDN DSARRTPDLL PRDEVARAIN TEVKEGRGTP HGGVYLDIAS RMSSEEIKRR LPSMYHQFME LAEVDITTDE MEVGPTCHYV MGGIEVDPDT GAAKTPGLFA AGECAGGMHG SNRLGGNSLS DLLVFGRRAG LGASDYVRAL GNRPTVSEEA VEAALKLALA PFDGPSEGQP ENPYTMQLDL QDTMNELVGI IRKADEIIEA QGKLDELRDR FKRMKVEGNR HFNPGWHLAI DLRNMLLVSE CVAKAALERT ESRGGHTRDD YPSMEAEWRR TLLVCRAQGD DVVVPSVTVT REDQVPMRDD LLELLDIEEL QKYYTDEELA NHPARRGS
|
| |