| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5645 |
|---|
| Symbol | |
|---|
| ID | 4881342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5895957 |
|---|
| End bp | 5898131 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640142963 |
|---|
| Product | putative helicase |
|---|
| Protein accession | YP_001073899 |
|---|
| Protein GI | 126438208 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.577217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGGT ACGAGGACGA ACTGCGCTCC GAACGCAGCT ATGTGTCGGG GCTCTACACC
CGGCTCGACG GGGAACGCGC GCGGGCCAAG GAGAAGTACG CCGCGGCGCT GCGCGGGGAC
GGCGCGCTCG TCGAACGCGA CGCCGAGGTG AGAGCCCTGG CCAAGGAGAT GCAGCGGCTC
GACGTGGCCG ACGACGGCCT GTGTTTCGGC CGGCTGGACG CCGACTCCGG TGAGCGTCTC
TACATCGGCC GGATCGGGAT CTTCGACCGC GACAACGACT TCGAACCGCT GCTCCTCGAC
TGGCGGGCGC CGCTGTCTCG CGCTTTCTAC GTCGCCACCG CCGCGCACCC CGAGGGGATG
CAGCGGCGCC GCCAGTTCCG CACCCGCGGG CGGCAGATCC TCGACTTCAC CGACGAGGTC
TTCGGCAAGC CTCGCGGCGA CGAACGCGGC GGCGATTCGG CGCTGCTCGC CGCGGTGAAC
GCGCCTCGCG GTGAGGGTAT GCGCGACATC GTCGCGACGA TCCAGGCCGA GCAGGATGCG
ATCATCCGGC TCGACCACCC GGGGGTGCTG GTGATCGAGG GCGGGCCGGG GACCGGTAAG
ACCGTGGTGG CACTGCACCG GGTCGCCTAT CTGCTGTACA CGCAGCGCGC CCGCATCGAA
CGTCACGGCG TGCTGGTGAT CGGTCCGAAT CCGGCGTTCC TCGACCACAT CAGCCGTGTG
CTGCCGTCGC TGGGTGAGAC CAACGTCGTG CTGATGACGA CCGGCGATCT GGTGCCGGGC
ATTTCGGCCA CCGCCGAGGA CGACGCCGCC GACGTGAAGG GTTCGCTGAC GATGCTCGAC
GTGCTGGCGG CGGCGGTCGC TGACCGGCAA CGGGTGCCCG AACAGCCCCT GGTCATCGAG
CTGCCGGACG TCACCGTGCA GATCGACCCC GACACCGCCC AGTGGGCGAT CGAAGAGGCT
CGCGGCAGCG GACTGCCACA CAACCACGCG CGCAAGGTCT TTCGCGAGAC GGTCGGATGG
GTGCTGACCG AACGCGCGGT GTCCCGAATC GGTCGGGGCT GGTTGTCGCG CGCGGACAAG
GGGGCTTGGG AGGAGCTGCG CGCCGATGTC CTCGAAGACC TCGCCGACAG CGAGCAGTAC
CTCGCGGCGC TCGACGAGTT GTGGCCGGTG CTCACCCCGC AGACCCTGCT GGCCGATCTG
TACGAGTCCC GGGAACGTTT GCGTGCAGCG GGCGCCGACG AAAGGCTGTG GCGCTCCGAC
GGTGCCGCGT GGACGGTGTC GGACGTGCCG TTGCTCGACG AACTCGTCGA CCTGCTGGGC
CGCGACATGG CGGCCGACAT CGCCGCCGCG AAGGAACGCG AGGCCGAGAC CGATTACGCC
GAGGGCGTCC TCGAATCGAT GGTCGCCCAC GAGGATCTGA TGGACGACGA AGACCTGCTG
CTCGCGACCG ACCTGTTGCA CGGCGAGGAG CTGGCCGAAC GCTTCACCGA ACGCGACAAC
CGCGAGCTGG CCGAACGCGC TGCCGCGGAT CGTGATTGGA CCTATCGGCA CGTCGTGGTC
GACGAGGCAC AGGAACTGTC GGCGATGGAC TGGCGGGTGC TGATGCGGCG CTGCCCGAGC
AAATCGTTCA CGGTCGTGGG CGATCTCGCG CAGCGCCGCT CGGCCGCAGG CGCCCGGTCC
TGGGGGGCGA TGCTCGACAC GTACGTACCC GGCCGCTGGG TCTACCGCCC CCTGTCGGTC
AACTACCGCA CCCCCGCGGA GATCATGGCG GTCGCGGCCG CGGTACTCGC CGAGTTCGCA
CCCGACGTCA CACCGCCCGA GTCGGTGCGG TCGACGGGGG TGCAGCCGTG GCGCCGACAG
GTGACTCCGG ACGAATTGCC CTCGGCGATC GGCGAATTCG TGGACGACGA ATCCGGACGC
GAGGGCACCA GTGTCGCGAT CGGTCCACCG GATGTGCCGG GGACGGTGGC GCCGAGCGAG
GTCAAGGGTC TGGAGTTCGA CGCCGTCCTC GTGGTCGAGC CGGAGCGGAT CTTCGACGGT
CCCCGGGGCG CGGCCGAACT CTACGTCGCC CTCACCCGCG CCACCCAGCG CCTCGGCATC
GCGCACTGCG GGCCCCTTCC GCCTGCGCTG GCGGCACTGG TCGATATCCC TGTCGATCGG
GAAGCCGCGC GTTAG
|
|---|
| Protein sequence | MPGYEDELRS ERSYVSGLYT RLDGERARAK EKYAAALRGD GALVERDAEV RALAKEMQRL
DVADDGLCFG RLDADSGERL YIGRIGIFDR DNDFEPLLLD WRAPLSRAFY VATAAHPEGM
QRRRQFRTRG RQILDFTDEV FGKPRGDERG GDSALLAAVN APRGEGMRDI VATIQAEQDA
IIRLDHPGVL VIEGGPGTGK TVVALHRVAY LLYTQRARIE RHGVLVIGPN PAFLDHISRV
LPSLGETNVV LMTTGDLVPG ISATAEDDAA DVKGSLTMLD VLAAAVADRQ RVPEQPLVIE
LPDVTVQIDP DTAQWAIEEA RGSGLPHNHA RKVFRETVGW VLTERAVSRI GRGWLSRADK
GAWEELRADV LEDLADSEQY LAALDELWPV LTPQTLLADL YESRERLRAA GADERLWRSD
GAAWTVSDVP LLDELVDLLG RDMAADIAAA KEREAETDYA EGVLESMVAH EDLMDDEDLL
LATDLLHGEE LAERFTERDN RELAERAAAD RDWTYRHVVV DEAQELSAMD WRVLMRRCPS
KSFTVVGDLA QRRSAAGARS WGAMLDTYVP GRWVYRPLSV NYRTPAEIMA VAAAVLAEFA
PDVTPPESVR STGVQPWRRQ VTPDELPSAI GEFVDDESGR EGTSVAIGPP DVPGTVAPSE
VKGLEFDAVL VVEPERIFDG PRGAAELYVA LTRATQRLGI AHCGPLPPAL AALVDIPVDR
EAAR
|
|---|
| |