| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5634 |
|---|
| Symbol | |
|---|
| ID | 4881331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5885735 |
|---|
| End bp | 5886325 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640142952 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001073888 |
|---|
| Protein GI | 126438197 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.405857 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCGC CCGTGACGAC AGCGCCAGCG GGTCGCCGCG GGCGCGGTGC GCGCGAGCGC
ATCATCCGCG CCGCATCGGC CCTGTTCTAC CGCCGTGGCA TCCATGCCAC CGGTGTCGAC
CTGCTGACGC AGGAGGCTCA GGTCTCCAAA CGCACGTTCT ACCAACATTT CCCGAGCAAG
GTCGAGCTGG TCGAGACGTA CCTGCGGGAG ATCGCCGAGA ACGGTGGCTC ACCGGCCGAG
CGGCGGCTGG ACCTGCCCGG TCTCGGGCCG CGCGAGCGCC TTCTCGCGAT CTTCGACGCG
TCGGCGGTCA AGCGGTTCCG CGGCTGCCCC TTCCACAATG CGGCCGTGGA ATCCGCCGGA
GCGCTCGAGG GCGTCGACGA GATCGTGCGC GAACACAAGC GGTGGTTCGC CGATCGGTTG
GCTCAGGTGT CCACCGAGGC GGGCGCCCGC GACCCGTACC TGCTGGGCGA ACAGCTGCTG
GTGCTGTTCG AGGGCGCCAC GGCGCTGTCC ACGTCGATGG GTGACACGGC CCCGATGGTG
CATGCCCGCT CGGCGGCGGC GCAGTTGATC GACGACGCCT GTCGCGTCTG A
|
|---|
| Protein sequence | MLPPVTTAPA GRRGRGARER IIRAASALFY RRGIHATGVD LLTQEAQVSK RTFYQHFPSK
VELVETYLRE IAENGGSPAE RRLDLPGLGP RERLLAIFDA SAVKRFRGCP FHNAAVESAG
ALEGVDEIVR EHKRWFADRL AQVSTEAGAR DPYLLGEQLL VLFEGATALS TSMGDTAPMV
HARSAAAQLI DDACRV
|
|---|
| |