Gene Mjls_5617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5617 
Symbol 
ID4881314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5868368 
End bp5870002 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content69% 
IMG OID640142935 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_001073871 
Protein GI126438180 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACTT TTACCGAGAC CATGTACAGC AATGCCGGCT CGAGCACCAA AGGGATGGTC 
ACCGGAGAAC CGGGCGACCC CGTCCGCCAC ACCTGGCTCG AGGTCCACGA GCGTGCCTTG
AGAATCGCCG GCGGGCTCGC CGCGGCAGGG GTCGGGCACG GCGACGCGAT CGCGGTGCTG
GCCGGGGCGC CCGTCGAGAT CGCGCCGACA GCCCAGGGCA TCTGGATGCG CGGTGCGAGC
CTGACCATGC TGCACCAGCC GACCCCGCGC ACCGATCTGC AGCGCTGGGC CGACGAGACC
ACCGCGGTCA TCGACATGAT CGACGCGAAG GCCGTGATCG TGTCCGAGCC GTTCATGCCC
GCGGCTCCGC TGCTGTCCGG GCTCGGGATG CTGGTGCTTA CGGTGGCCGA TCTCCTCGCC
CACGAACCGG GAGAGATGGT CCCGACCGGT GACGACGACA TCGCCCTCAT GCAGTTGACG
TCCGGGTCCA CGGGTTCACC GAAGGCCGTG CAGATATCGC ACGCCAACGT GGTGGCCAAC
GCCGAGGCGA TGATCGTCGG CTGCGAGTTC GACATCGAGA CCGACGTGAT CGTGAGTTGG
CTGCCGTGCT TCCACGACAT GGGCATGACG GGCTACCTCA CCGTGCCCAT GTATTTCGGC
GCGGAACTGG TCAAGGTCAC GCCGATGGAC TTCCTGCACG ACACGCTGCT GTGGGCCAAG
CTCATCCACA AATACCGCGG CACCATGACC GCGGCGCCCA ACTTCGCCTA CACCCTGTTC
GCCAAGCGGC TGCGCCGGCT CGCCACCCCC GGCGAGTTCG ACCTGTCGTC GCTGCGGTGG
GCGCTGTCGG GCGCCGAGCA GGTCGACCCG CTCGACGTCG AGGATCTCTG CGAAGCCGGT
GCGCCGTTCG GGTTGAAACC GGAGGCGATC ATCCCGGCGT ACGGCATGGC CGAGACGACG
GTCGCGGTGT CGTTCTCCGA ATGCGGCCGC GGGATGGTCG TCGACGAGGT GGACGCCGAC
CTGCTGTCCG TGCTCCACCG CGCCGTGCCT GCGAACAAGG GCCACACCCG GCGGCTCGTA
TCGCTGGGCC GGCCGCTGCC GGGGCTCGAG GTGCGGGTGC TCGACGAGGA CGGTGCGGTC
CTGCCCGCCC GCGGGGTGGG GGTGATCGAG GTGCGGGGCC GGCCGGTGAG CCGCGGCTAC
ACCACGACCG CCGGCTTCGT CCCGGCGCAG GACGAGTTGG GTTGGTACGA CACCGGTGAC
CTCGGATACC TCACCGAGGC AGGCGAGGTG GTGGTGTGCG GCCGGCTCAA GGACGTGATC
ATCATGGCCG GCCGCAACAT CTATCCGACG GACATCGAGC GGGCCGCGGC CCGCGTCGAC
GGTGTGCGGC CGGGTTGCGC GGTGGCCATC CGCCTCGACG GAGGCCACCC GCGCGAGACA
TTCGCCGTGG CGGTGGAGAG CAAGCACTTC GAGGATGTCA AGCAGGTCCG GCGCATCCAG
CGTCAGGTGG CCCACGAGGT GGTGGCGGAG GTCGACGTGC GGCCCCGCAA CGTGGTGGTG
CTCGAGCCCG GCATGATCCC GAAGACACCG TCGGGCAAGC TGCGCCGGGC CCACGCCCTG
TCGCTGATCG ACTAA
 
Protein sequence
MSTFTETMYS NAGSSTKGMV TGEPGDPVRH TWLEVHERAL RIAGGLAAAG VGHGDAIAVL 
AGAPVEIAPT AQGIWMRGAS LTMLHQPTPR TDLQRWADET TAVIDMIDAK AVIVSEPFMP
AAPLLSGLGM LVLTVADLLA HEPGEMVPTG DDDIALMQLT SGSTGSPKAV QISHANVVAN
AEAMIVGCEF DIETDVIVSW LPCFHDMGMT GYLTVPMYFG AELVKVTPMD FLHDTLLWAK
LIHKYRGTMT AAPNFAYTLF AKRLRRLATP GEFDLSSLRW ALSGAEQVDP LDVEDLCEAG
APFGLKPEAI IPAYGMAETT VAVSFSECGR GMVVDEVDAD LLSVLHRAVP ANKGHTRRLV
SLGRPLPGLE VRVLDEDGAV LPARGVGVIE VRGRPVSRGY TTTAGFVPAQ DELGWYDTGD
LGYLTEAGEV VVCGRLKDVI IMAGRNIYPT DIERAAARVD GVRPGCAVAI RLDGGHPRET
FAVAVESKHF EDVKQVRRIQ RQVAHEVVAE VDVRPRNVVV LEPGMIPKTP SGKLRRAHAL
SLID