Gene Mjls_5230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5230 
Symbol 
ID4880928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5476768 
End bp5477760 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content71% 
IMG OID640142542 
Producthypothetical protein 
Protein accessionYP_001073485 
Protein GI126437794 
COG category[S] Function unknown 
COG ID[COG1300] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.230023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.753806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTCG ACGCGTTCGT GCTGGCCCAC CGTCCCACCT GGGACCGGCT CGACGAGCTC 
GTCAAGCGGC GCCGCCGGCT GACCGGCGCC GAGGTCGACG AGCTGGTGGA CCTGTACCAG
CGGGTGTCGA CGCACCTGTC GATGGTGCGC TCGGCGTCCA CGGATTCGGT TCTGGTCGGC
CGGTTGTCCG GGCTGGTGGC GCGGGCCCGC GCGGCGGTGA CCGGTGCGCA CGCCCCACTG
TGGCGGGAGT TCCTGCGCTT CTGGACCGTG TCGTTCCCGG TCGTCGCGTA CCGCTCCTGG
CGGTGGTGGC TCGGCTCGGC CGCCGCGTTC TTCCTCGTCG CCGCGCTGAT CGGTTTCTGG
GTCGCGGGCA GCCCCGAGGT GCAGTCGGCG GTCGGCACCC CCAGCGACAT CGATCAGCTG
GTCAACAACG ACTTCGCCTC GTACTACAGC GAGAACCCCG CGGGTTCGTT CGCGCTGCGG
GTGTGGGTCA ACAACGCGTG GGTGGCCGCG CAGTGCATCG GTTTCGCGAT TCTGCTCGGG
CTGCCGATTC CGTACATCCT GTTTCAGAAC GCAGCCAACC TCGGCCTGAC CGGCGGGTTG
ATGTTCGACG CGGGCAAGGG CGACATCTTC CTGGGCCTGC TGACGCCGCA CGGGCTGCTC
GAACTGACCG CCGTGTTCCT CGCGGCCGCC GCCGGGATGA GGTTGGGCTG GATGGTCATC
GCCCCCGGTC ACCGGCCGCG CGGTCAGGTG CTCGCCGAAC AGGGCCGGGC CGTGGTGGCC
GTCGCCGCCG GGCTGGTGGT GGTGCTGCTG CTGTCCGGGT TGATCGAGGC GCTGGTGACC
CCGTCGCCGC TGCCCACGTT CGCGCGGATC GGGATCGGGG TCGCGGCCGA GGTCGCGTTC
CTGGCCTACG TCGTGCACTT CGGCCGCAAG GCCGTCCGGG CGGGCGAATC GGGGGACCTC
GAAGACGCGC CCGACGTGGT GCCCACCGGC TGA
 
Protein sequence
MDVDAFVLAH RPTWDRLDEL VKRRRRLTGA EVDELVDLYQ RVSTHLSMVR SASTDSVLVG 
RLSGLVARAR AAVTGAHAPL WREFLRFWTV SFPVVAYRSW RWWLGSAAAF FLVAALIGFW
VAGSPEVQSA VGTPSDIDQL VNNDFASYYS ENPAGSFALR VWVNNAWVAA QCIGFAILLG
LPIPYILFQN AANLGLTGGL MFDAGKGDIF LGLLTPHGLL ELTAVFLAAA AGMRLGWMVI
APGHRPRGQV LAEQGRAVVA VAAGLVVVLL LSGLIEALVT PSPLPTFARI GIGVAAEVAF
LAYVVHFGRK AVRAGESGDL EDAPDVVPTG