| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5133 |
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| Symbol | |
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| ID | 4880831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 5376376 |
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| End bp | 5378247 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640142443 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_001073388 |
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| Protein GI | 126437697 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.582913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGA CCCTCGATCA GGTCGTCACC GCGGCGGCCG CGGAGTTGAT GGCGGCCACC
GCCACCAACG TGGTCGAAAG CTGCACCCGG GTCCTCGCCG ACGTCGTCGC CCACCTGGGG
GTCGACTTCA GCTTCCTGCG GCACAACGAC CACACCATCA AGGCCACCAA GCTGGTCGCC
GAATGGCCGA TCCGCGACCA CATCCCGGAC CCGGACCCGA TCGGCACCAT CTACTTCGCC
GAGGCCGACC CCGTCTTCCG GCAGGCCGAG TACCTCAAGA CACCGCTCAT CGTGCGTCCC
GAACCGGACA ACGACGACTA CCAGCGCCGG ATCGAGGAGG GCCGAGGCGT GCCGTCGGTG
TCGATGGCAT GCGTGCCATT GCTCTCGGGT GAGATGACCT CTGGCATCCT CGGCTTCATC
AAGATCGGTG ACCGTGAGTG GACCACCGAG GAGCAGAACG CGCTGCAGGC GATCGCCACG
CTGTTCGCCC AGCTGCAGGC CCGCATCGCC GCCGAGGAGC AGCTCCAGTA CCTCGCCGAA
CACGACGATC TGTCCGGACT GCTGAACCGC CGGGCGCTGA TGGCACACCT CGACCGAAGG
CTCGCCGAGG GTCAGCCCGG TCCGGTGTCG GTGCTGTTCC TCGATCTCGA CCGGCTCAAG
ACCGTCAACG ACTATCTGGG CCACAGCGCC GGTGACCAGT TCATCAAGAT GTTCGCCGAG
CGGTTGCGGG CGGGCACCGA GAAGCCCGCC GTGATCGCCC GCGTCGGCGG TGACGAGTTC
GTGGTGGTCC CCGATGAGCC GATGGACGTC GTGGCGGTCG AGAGTTTCGC CCGCCGGCTG
CAGACGTGGT TGCAGCGGCG GGTCGTGATC GACGGCGAGA TGCTTGCGCG CACAGTGAGC
ATCGGGGTCG CCGTCGGCAC TCCCGGTGAC GACACCACAT CGGATCTGCT GCGCCGCGCC
GACCAGGCGG CGCTGTCGGC GAAGAGCACC GGCGGCAGCA AGACGGCGGT GTTCACCACG
GAGATGGCGT CCCAGCACGC CATCCGCAAC GACATCGAAC TGCACCTCGA GGGTGTCATC
GACGAGGCGA GCAGCGCGCT CGTCCTGCAC TACCTACCCG AGATCGACAT GCGCACCGGG
AAGGTGCTCG GCACCGAGGC ACTGGTCCGC TGGCGGCATC CGACCCGGGG CCTGCTGCTG
CCCGAGTCGT TCATCGGGGT GGCCGAATCC ATCAACCTCG CAGGCAAACT CGGCCGACTG
GTGATGCGCT CGGCATGCGC GGACTTCGCC CGCTGGAGGT CGCGCCGCAC CGCAGGCGAC
GCCATCCTGC GCCTCAACGT CTCACCCGTG CAACTGGTTT CGGACGGTTT CGCGGCGACC
GTCGCCGGCA CCCTCGACGA GTTCGGGGTC GACGGTTCCG CGGTGTGCCT GGAGATCACC
GAGAGCGTGG TGGTCCAGGA CATCGAGGCC ACCCGCCACA CACTGGCCGC ACTCAAAGAG
GTCGGCGTGC GCATCGCGAT CGACGACTTC GGTACCGGCT ACAGCGTTCT CACGCACCTG
AAGTCACTGC CCGTCGACAC CGTCAAGATC GACCGCAGCT TCGTCCGTGA CCTCGGCGCC
AGCCCCGGCG ACCTGGCGAT CGTTCGGGCC ATCCTGGCGT TGGCCGATGC GTTCGAACTC
GAGGTGGTGG CCGAGGGGGT GGAGACCGTC GCGGCCGCCA AGACGCTGCT CGAACTGGGT
TGCCCACGCG CGCAGGGGTT CATGCTGTCG CGTCCGGTCG ACGCCGCGGC GATGGAGGCG
TTGTTCCGTG AGGGGCGCAT CGCCGTCGAC GCGTGGCGTG ACGACGCCGC AACCGTGAAC
GGGCGGCCGT AG
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| Protein sequence | MTRTLDQVVT AAAAELMAAT ATNVVESCTR VLADVVAHLG VDFSFLRHND HTIKATKLVA
EWPIRDHIPD PDPIGTIYFA EADPVFRQAE YLKTPLIVRP EPDNDDYQRR IEEGRGVPSV
SMACVPLLSG EMTSGILGFI KIGDREWTTE EQNALQAIAT LFAQLQARIA AEEQLQYLAE
HDDLSGLLNR RALMAHLDRR LAEGQPGPVS VLFLDLDRLK TVNDYLGHSA GDQFIKMFAE
RLRAGTEKPA VIARVGGDEF VVVPDEPMDV VAVESFARRL QTWLQRRVVI DGEMLARTVS
IGVAVGTPGD DTTSDLLRRA DQAALSAKST GGSKTAVFTT EMASQHAIRN DIELHLEGVI
DEASSALVLH YLPEIDMRTG KVLGTEALVR WRHPTRGLLL PESFIGVAES INLAGKLGRL
VMRSACADFA RWRSRRTAGD AILRLNVSPV QLVSDGFAAT VAGTLDEFGV DGSAVCLEIT
ESVVVQDIEA TRHTLAALKE VGVRIAIDDF GTGYSVLTHL KSLPVDTVKI DRSFVRDLGA
SPGDLAIVRA ILALADAFEL EVVAEGVETV AAAKTLLELG CPRAQGFMLS RPVDAAAMEA
LFREGRIAVD AWRDDAATVN GRP
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