Gene Mjls_5104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5104 
Symbol 
ID4880802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5350603 
End bp5351499 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID640142414 
Productperiplasmic solute binding protein 
Protein accessionYP_001073359 
Protein GI126437668 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.861086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.244188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT GCTCGGGAGG CGGCGATTCG GCGGCGCCGA GCGAGCAACC CGGCGGTGAG 
TGCCCGACGG AGCCGGTGTC GGTGGTGGTC AGTGTCGACC AGTGGGGTGG CATCGTCTCC
CAGCTCGGCG GCCAGTGCGC GACGGTCTCC ACCGTGGTCG CGAGTTCGTC GGTCGACCCG
CACGACTTCG AACCCGCACC CAAGGACGCG GCGCTCTTCG AGGGTGCGCA ACTGATCGTC
GTCAACGGCG GCCACTACGA CGAGTGGGCC TCCAAACTCG CCGAGGGATC GGCACCGGAC
GCACCGGTGA TCGATGCGGC CGAGGTGAGC GCAGAGGCTG CCGACGTCGG CGCGGACATG
CACGCTGCGA ACCCGCACAT CTGGTACAGC CCCGCCGCGG TGACGGCGGT TGCCGATGCG
GTCACCGCGG AGCTCGGCAG GCTCGCACCC GATGCGGCGG ACTACTTCAC CGAACGTCAG
GCCGAGTTCG GCGATGCGCT CGCGCCCTAC CATCAGGTCA TCGGATCCAT CAAAGCCACG
GCCGCAGGCA AGACCTACGC CGCCACCGAG AACGTCTTCG ACGACATGGC CGCCGCCGTC
GGGCTGACGA ACCGCACCCC GCCCGGCTAC CAGGCCGCCG CCGCGAACGA GAGCGACCCC
TCACCGGCCG ATCTGGACGC GTTCCTGCGC CTGCTGAGCG ACCGCGGCGT CGACGTCCTC
ATCTACAACG TGCAGACCGA AGGGTCTGTC CCACAACAGA TCCGGGCCGC CGCCGAACAG
GCGGGAGTGC CCGTCGTCGA GGTGACGGAG TCCGTGCCGC CCGGTGCCGC GTCGTTCCAG
GCCTGGCAGG TCGACCAACT CTCGGCGCTG GCCGAGGCGC TCGGTGTCGG CGGCTGA
 
Protein sequence
MTACSGGGDS AAPSEQPGGE CPTEPVSVVV SVDQWGGIVS QLGGQCATVS TVVASSSVDP 
HDFEPAPKDA ALFEGAQLIV VNGGHYDEWA SKLAEGSAPD APVIDAAEVS AEAADVGADM
HAANPHIWYS PAAVTAVADA VTAELGRLAP DAADYFTERQ AEFGDALAPY HQVIGSIKAT
AAGKTYAATE NVFDDMAAAV GLTNRTPPGY QAAAANESDP SPADLDAFLR LLSDRGVDVL
IYNVQTEGSV PQQIRAAAEQ AGVPVVEVTE SVPPGAASFQ AWQVDQLSAL AEALGVGG