Gene Mjls_5101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5101 
Symbol 
ID4880799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5347849 
End bp5348949 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content70% 
IMG OID640142411 
ProductLacI family transcription regulator 
Protein accessionYP_001073356 
Protein GI126437665 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.181934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGA GTGCGGAGCC GCGGCGCCAT GCGACCCTGG CCTCGCTCGC CGCGGAACTG 
AAGGTCAGCC GCACCACGAT CTCCAATGCG TACAACCGGC CGGACCAGTT GTCGGCCGAA
CTGCGCGAGC GAATCTTCAG CGCCGCCAAA CGCCTCGGCT ACCCCGGCCC CGATCCGGTG
GCCAGATCGC TGCGCACCCG CAGGGCCGGT GCGGTCGGGC TGATGATCAC CGAACCGCTC
AACTACTCCT TCAGCGATCC GGCCGCACTG GATTTCGTTG CGGGCCTTGC GGAATCGTGT
GAGGAGGCCG GCCAGGGGCT GCTCCTGGTC GCCATCGGGC CGAACCGCAG CGTGGCGGAC
GGTTCGGCCG CCGTCCTGGC CGCCGGCGTC GACGGTTTCG TCATCTACTC CGCGAGCGAC
GACGATCCGT ACCTTCCGGT CGTGCAGCAG CGGCACCTGC CGGTGGTGGT GGTCGACCAA
CCCAAAGACG TCCCCGGCAC CTCCCGCGTG GGTATCGACG ACCGCGCGGC GATGCGTGAG
TTGACCGAAT ACGTTCTGGG CCTTGGCCAC CGCGACATCG GACTGCTCAC GATGCGGCTC
GGCCTGGACC GGCCCGACGG CGATCCCCGC CCCGCCGTCG CCCATCCGGA CCGGCTGCGG
ACACCGCACT TCCACGTTCA GCGTGAGCGC ATCGGAGGTG TGTTCGACGC GATCGCCGCG
GCCGGACTCG ATCAGCGCGC GGTGACGGTC GTCGAGAGCT ACGAGCACCT GCCCACTTCG
GGCGGCGCGG CCGCCGAGGT CGCGCTGGCC ACCAACCCGC GGCTGACGGC GCTGATGTGC
ACCGCCGACG TGCTCGCGCT GTCGGCGATG GACCATCTGC GCTCGCGCGG CATCTACGTC
CCGGGACAGA TGACGGTCAC GGGGTTCGAC GGCATCCCCG ATGCGGTGCG CCGCGGACTG
ACCACGGTCG TCCAACCGAG TATGGAGAAG GGGCGTCGCG CGGGAAGGCT GCTGCACCAG
CCACCCCGTA ACGGTCTGCC CGTCGTCGAC ATCCTCGACA CCCGCATGGT GCGCGGCCGC
ACCGCCGGTG CGCCCGCCTG A
 
Protein sequence
MSRSAEPRRH ATLASLAAEL KVSRTTISNA YNRPDQLSAE LRERIFSAAK RLGYPGPDPV 
ARSLRTRRAG AVGLMITEPL NYSFSDPAAL DFVAGLAESC EEAGQGLLLV AIGPNRSVAD
GSAAVLAAGV DGFVIYSASD DDPYLPVVQQ RHLPVVVVDQ PKDVPGTSRV GIDDRAAMRE
LTEYVLGLGH RDIGLLTMRL GLDRPDGDPR PAVAHPDRLR TPHFHVQRER IGGVFDAIAA
AGLDQRAVTV VESYEHLPTS GGAAAEVALA TNPRLTALMC TADVLALSAM DHLRSRGIYV
PGQMTVTGFD GIPDAVRRGL TTVVQPSMEK GRRAGRLLHQ PPRNGLPVVD ILDTRMVRGR
TAGAPA