Gene Mjls_5086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5086 
Symbol 
ID4880784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5333420 
End bp5334166 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID640142396 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001073341 
Protein GI126437650 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.448544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGATC TCGCCGGGCG CACCGCGCTG GTGACAGGCG GTGCCAGCGG GATCGGGGAG 
GCGTGTGCAC GCGAACTCGC CGCCCGCGGT GCCACCGTCA CCGTCGCCGA CCGCGACGAA
ACGGCCGCTA CCGCACTGGC CGACGAGATC GGCGGCAGCG CCTGGGTGGT GGACCTGCTC
GACGTGTCGG CGCTCGAAGG TCTCGCACTG GACACCGACA TCCTGGTCAA CAACGCCGGT
GTGCAGCGCA TCGACCCGAT CGTCGACTTC GCCCCGGAGA ACTTCCGGAT GCTGATGACG
CTGATGGTCG AGGCGCCGTT CCTGCTCATC CGCGCGGCGC TGCCGTACAT GTACGCGCAG
AAATTCGGCC GGGTCATCAA CATCTCGTCG GTGCACGGGT TGCGCGCCTC GGAGTACAAG
GTCGGCTACG TCACCGCCAA GCACGCGCTC GAGGGGCTGT CGAAGGTGAC CGCGCTGGAA
GGCGGACCGC ATCAGGTGAC CAGTAACTGC GTCAACCCCG GCTACGTCCG AACCCCGCTG
GTCACCAAAC AGATAGCCGA TCAGGCCAAG GTGCACGGCA TCGGTGAAGA TGACGTGGTG
ACCCAGATCC TGCTCAAGGA GAGCGCCATC AAGCGACTCG TCGAACCGTC CGAAGTCGGA
TCGCTGGTGG GCTGGTTGGC CTCGCCGCAG TCCGGCATGG TGACCGGTGC GGCCTACACC
ATGGACGGCG GATGGAGCGC CCGGTGA
 
Protein sequence
MRDLAGRTAL VTGGASGIGE ACARELAARG ATVTVADRDE TAATALADEI GGSAWVVDLL 
DVSALEGLAL DTDILVNNAG VQRIDPIVDF APENFRMLMT LMVEAPFLLI RAALPYMYAQ
KFGRVINISS VHGLRASEYK VGYVTAKHAL EGLSKVTALE GGPHQVTSNC VNPGYVRTPL
VTKQIADQAK VHGIGEDDVV TQILLKESAI KRLVEPSEVG SLVGWLASPQ SGMVTGAAYT
MDGGWSAR