| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5048 |
|---|
| Symbol | |
|---|
| ID | 4880746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 5290664 |
|---|
| End bp | 5291503 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640142358 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001073303 |
|---|
| Protein GI | 126437612 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.96036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGAA ACTGGTTCAT CACCGGCGGG ACGCCGGGTG GGTTCGGCAT GGCTTTCGCC
GAGGCCGCGC TCGAGGCCGG CGACCGCGTG GTGCTCACCG CACGGCGGCC CGCCGAGTTG
GACACGTGGG TACGAACCCA CGGTGATCGC GTGCTCGTTG TGCCGTTGGA CGTCACCGAT
GCCGCACAGG TGCGTGAGGC GGTTGCAGCG GCCGAGGATT TCGGCGGCAT CGACGTCTTG
GTCAACAACG CCGGACGCGG GTGGTACGGG TCCGTCGAGG GGATGGCCGA TCGGGACGTT
CGCGGGATGT TCGAGCTGAA CTTCTTCTCG GTGGTCTCGG TCATCCGCGC GGTGCTACCC
GGTATGCGCG CCCGGGGCGA CGGCTGGATC GTCAACGTGT CGTCGGTCGC GGGTCTGCAC
GGTGTCACCG GGTTCGGCTA TTACAGCGCA ACGAAATTCG CCCTCGAAGG GCTCACCGAG
GTATTGCGTG AGGAGGTCTC TCCGTTCGGG ATCCGCGTGT TGGCGGTGGA GCCCGGCGCG
TTCCGCACCC GCGCCTACGC CGGTTTCGCC GACGAACCAG TCGAGGAAGC GATCAAGGAC
TACCGCCCGA TGCTGGAGGA GGTCCGGGCG GCCATGGTTG CCCAGAACGG TTCCCAGCCC
GGGGACCCCC ACCGGGGCGC GCGGGCGGTG ATCTCGGCCA TGGCCCAGGA TCCGCCGCCG
CACCGACTCG TCCTCGGCGG CGATGGGTTC GACGTCGCCG TCGCGGCGCT CGAACAGACG
CTGACCGACC TCCGCCGCAA TGAAGCGCTG TCCCGCGGCG CCGACTTCTC GGCCCGGTGA
|
|---|
| Protein sequence | MTRNWFITGG TPGGFGMAFA EAALEAGDRV VLTARRPAEL DTWVRTHGDR VLVVPLDVTD
AAQVREAVAA AEDFGGIDVL VNNAGRGWYG SVEGMADRDV RGMFELNFFS VVSVIRAVLP
GMRARGDGWI VNVSSVAGLH GVTGFGYYSA TKFALEGLTE VLREEVSPFG IRVLAVEPGA
FRTRAYAGFA DEPVEEAIKD YRPMLEEVRA AMVAQNGSQP GDPHRGARAV ISAMAQDPPP
HRLVLGGDGF DVAVAALEQT LTDLRRNEAL SRGADFSAR
|
|---|
| |