Gene Mjls_4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4888 
Symbol 
ID4880587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5131561 
End bp5133123 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content71% 
IMG OID640142194 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001073144 
Protein GI126437453 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.162383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACT TCGACGTGGT CGTCATCGGC GCCGGGCACA ACGGGCTCAC CGCGGCGGCC 
CTTCTGCAGC GGTCAGGACT GCGCACCGTC TGCCTGGAGG CCAAGCGGTA CGCCGGCGGG
ATGGCCTCGA CCGTCGAACT GTTCGACGGG TACCGCTTCG AGATCGCCGG CTCCCTGCAG
TTCCCGACGT CGGCGACGGT CAGCCGCGAA CTCGGCCTCG ACGAACTGCC CACCGTCGAC
CTCGAGGTGA TGTCGGTGTC GCTGCGCGGC GTCGGCGACG CCCCGGTCGT CTACTACACC
GATCCGATGC GGATGCTGAC CCACCTCGAC GAGGTGCACG GCGCCGACGC CGTCGCCGGG
ATGGCCGGTC TGATGGCGTG GAGTCAGGGG CCGACGCGGG CTCTCGGCCG GTTCGACGCC
GAGCGCCCGC CCAGATCGCT CGACGAGATG TACGCCTGTG CCGCAACCCC GTTCGAACGC
GCCGCGATCA CCGACATGCT GTTCGGGTCG GTCAGCGACG TACTGGACCG CTATCTGCCC
GACCGTGAGA AACACGGCGC GCTGCGCGGC ATGCTGGCGT TCCTCGCCGT CAACACCACC
TACCGCGGGC CCGCGACGCC GGGCAGTGCG GCGGCGCTGG CCTTCGGCCT GGCCGTGCCG
GACGAGAACG CCGCGCTGAT GAAGAAACTG CGCGGCGGGA TCGGCGCCCT CACCGACCAC
CTGTGCCGCC TGTTCACCGA GGCCGGCGGA GAGGTCCGGC TGCGCAGCAA GGTCGCGCGG
ATCGCGGTCG CCGACGGGCG CGTCTCCGGT GTCGCGCTCG AGGACGGGAC AACGCTCACC
GCGCACACGG TCGTCTCGGC CGTCGCCCCC GACCTCACCG TGACCGCACT GCTCGACCCC
GACGCCGTAA CCGCCGACCT CCGTGACCGC TTCGCACGCA TCGACCACCG GGGCAGCTAT
CTGCAGATGC ACTTCGCACT GGACGCCGGG CCCACCTTCG CCGCACCGTA CGAGATGCTC
AACGATCCCG AGATGCAGGC GGCCATCGGG CTGTTCAGCA CGCCGGAGGA GCTGCAGAGC
CAGTGGGAGG ACTGCCGGCG CGGTGTGGTG CCGGCCGACC CCGCGATCGC GCTGCAGATC
CCCTCGGCGC ACGATCCCAC GCTCGCGCCC CCCGGTAAGC ACGCCGCGTC GGCGTTCGCG
CTGTGGTTCC CCGTCGAGAC CGACCACGCC CGCTACGGGG AGATGAAGAC CGAGATGGGC
CGGCGGGTGA TCGAGAAGAT CACCCGCATC GCACCGGATT TCGCCGACCT CATCACCCGG
CACACCACGT TCACCCCACG CCACATGGGG ACGATGTTCG GGGCGCCGGG CGGCGACTAC
TGCCATGGCC TGATCCACCC CGAGCAGATG GGCCCGAACC GGCCCGGCCC GAAAGGGTAT
GTGGATCAAC CGCTTCCGGT CGACGGCCTC TACCTGGCCA GTGCCGGATG CCACGGCGGA
CCGGGCATCA CGTTCATCCC CGGCTACAAC GCCGCGCGTC AGGCGCTGAC CGACCTGGGC
TGA
 
Protein sequence
MPDFDVVVIG AGHNGLTAAA LLQRSGLRTV CLEAKRYAGG MASTVELFDG YRFEIAGSLQ 
FPTSATVSRE LGLDELPTVD LEVMSVSLRG VGDAPVVYYT DPMRMLTHLD EVHGADAVAG
MAGLMAWSQG PTRALGRFDA ERPPRSLDEM YACAATPFER AAITDMLFGS VSDVLDRYLP
DREKHGALRG MLAFLAVNTT YRGPATPGSA AALAFGLAVP DENAALMKKL RGGIGALTDH
LCRLFTEAGG EVRLRSKVAR IAVADGRVSG VALEDGTTLT AHTVVSAVAP DLTVTALLDP
DAVTADLRDR FARIDHRGSY LQMHFALDAG PTFAAPYEML NDPEMQAAIG LFSTPEELQS
QWEDCRRGVV PADPAIALQI PSAHDPTLAP PGKHAASAFA LWFPVETDHA RYGEMKTEMG
RRVIEKITRI APDFADLITR HTTFTPRHMG TMFGAPGGDY CHGLIHPEQM GPNRPGPKGY
VDQPLPVDGL YLASAGCHGG PGITFIPGYN AARQALTDLG