| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4795 |
|---|
| Symbol | |
|---|
| ID | 4880494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 5043891 |
|---|
| End bp | 5044679 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640142101 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001073051 |
|---|
| Protein GI | 126437360 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.368954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGG AGCAGTTCGA TCTCACCGGG CAGGTCGCGA TCGTGACCGG AGCGGGCAAG
GGAGTCGGTC AGGGCATCGC GCAGGTGCTG GCGGAGGCGG GCGCTGCGGT CGTCGGTACT
GCGCGCACAG AGTCTGATAT CGCCGCGACG ATTTCGGGAA TCGAGCGGGC AGGCGGCAAG
GGTGTCGCGG TTGTCGCCGA TGCCATGAGC CGACCGGACG GGGAGCGAGT GGTGGCGGCG
GCCATGGAGA ACTTCGGCCG TGTCGACATC CTGGTCAACA ATGTCGGGGG CTCGACGTAC
GCGCGGTTCC TCGACATCAC CGACGAGGAT TTCCGGCACA CTTTCGACTG GTGTGTGACG
TCGGCCTTCA TCATGAGCCA GCTGACCGCG CGGCACATGA TCGAGGCGGG ACGCGGATCG
ATCATCAACA TCTCATCCGG GTCGGCCCGG TTCGGCATCC GGGCGCTGGC CGCCTACTGC
ACGGCCAAGG GCGGACTCGA AGCGCTCACG CGCGCGATGG CGCAGGAGTT GGCGCCCAAG
ATCCGGGTGA ACGCCATCGC GCTGGGATCC TTTGCGACCG AGGGCCTGCA GGGCAGTCTG
GACATGATGC CGGGCTCGCT GGAGAAGATG AACGCGGCGA CGCCGCTACG CCGCCTCGGC
GACGTCGCCG ATCTCGGCCG GCTCTGTGTC TACCTGTCCA CCCGCGACTG TTACGCCACG
AACGCGATCT TCCACGTGGA CGGCGGCATC GAGTCCAACA ACTCGCCCCT GCCCATCCCC
GACTACTGA
|
|---|
| Protein sequence | MALEQFDLTG QVAIVTGAGK GVGQGIAQVL AEAGAAVVGT ARTESDIAAT ISGIERAGGK
GVAVVADAMS RPDGERVVAA AMENFGRVDI LVNNVGGSTY ARFLDITDED FRHTFDWCVT
SAFIMSQLTA RHMIEAGRGS IINISSGSAR FGIRALAAYC TAKGGLEALT RAMAQELAPK
IRVNAIALGS FATEGLQGSL DMMPGSLEKM NAATPLRRLG DVADLGRLCV YLSTRDCYAT
NAIFHVDGGI ESNNSPLPIP DY
|
|---|
| |