Gene Mjls_4564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4564 
Symbol 
ID4880265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4789808 
End bp4791211 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content67% 
IMG OID640141869 
ProductNLP/P60 protein 
Protein accessionYP_001072822 
Protein GI126437131 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.057013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGCC TCACTTCTTT TCTGAGTCTC TTCGCATTAA TGCCGGCACT GGTGATCAGC 
GCCCCGGGTA CCGCTGTTGC CGGGCATGAC GGCAGCCCCG ACCGCGACGA CGTTCCCTCA
TTGGTTGCGG CGGTCGCCGA AGCGAACCAG CGGATGGCCG ACGTCGGTAG CGACATCCAG
ATCAAGCAAG AGGGCGTCAA CCGTGCCCTG GTCGAAATCG CGGCCGCTCG CGACACCCTC
GCGCAGGCCC GACGCGACGT TGTTGCCAGC GACCAAGCCC TTACCGCCAG TCAACACGCG
ATCGAGGCCG CACAACAGCG TTTTGACCGC TTCGCCGCGT CGACCTATAT GAACGGGCCG
TCGGGTGCGT TGCCGCTGGC GCAAAGTCCC GAGGAGATCC TGGCCGGGGC CTCGACCCAG
CAGACCCTCA CCATCAGCTT TCAGCGGGTC CGCGACGACC TCTTGCGTCG GCAGACCGAT
CAGGCCAACA AGCTTTCTGC TGCGACGGCC GCGCGGGCGC GCGCCGAGAG CGCCGCCGCG
GACGCCCAAC GCCGGCAAGA CGACGCGGTA GCCGCACTCC GGGACGCCCA GCAGACGTTT
ACCGCACAGC AACGCGAGGT CGAACGGCTC GCTACCGAAC GCGACTCCGC TCAAGCTCGA
CTGGAAGCCG CCCGACCGGT GGCGGCGACA GCCGCCGCGC CCAGTGCGGC GCAACCCGGC
ACTGTTCCGG TATCCGGCGC TCCCTGGGAC CGCGGCACCA CGTCGCCGGG GGGCGCCACC
AAGGGGGGCC TGTGGGACAC CACGCTGCCG ATGGTGCCCA GCGCTAACGT GGCCGGCGAC
CCGGTGGCCA TCATCAATGC CGTCCTCAAG ATCATGGCGA CCTCGGCGCA GCTGACGGCC
GACATGGGCC GCAAGTTCCT CACCAAACTC GGCATTCTGT CTCCAGTCAC CGCCGCCGCA
GATCCCGGCA TCACCAACGG ACGCATCCCC CGCCTCTACG GCCGCCAGGC CTCAGAGTTC
GTGATTCGCC GCGCCATGTC ACAACTGGGC GTGCCTTACT CCTGGGGCGG CGGCAACGCC
AACGGCCCGT CACGAGGCAT CGACCAGGGC GCCAACACCG TGGGTTTCGA CTGTTCGGGC
CTGATGCTGT ATGCCTTCGC CGGCGTCGGC ATCAAACTCG ACCACTACTC CGGATCGCAA
TACAACGCAG GCCGCAAGAT CCCCTCGTCA CAGATGCGAC GCGGTGACCT CATCTTTTAC
GGCCCCAACG CCAGCCAGCA CGAAGCGATG TATCTGGGCG ACGGCATGAT GATCGAAGCC
CCCTACACCG GGTCGGTCGT CAAGATCTCG CCCGTGCGCA CCTCCGGCAT GACGCCCTAC
GTCACCCGCT TGATCGAATA TTGA
 
Protein sequence
MRRLTSFLSL FALMPALVIS APGTAVAGHD GSPDRDDVPS LVAAVAEANQ RMADVGSDIQ 
IKQEGVNRAL VEIAAARDTL AQARRDVVAS DQALTASQHA IEAAQQRFDR FAASTYMNGP
SGALPLAQSP EEILAGASTQ QTLTISFQRV RDDLLRRQTD QANKLSAATA ARARAESAAA
DAQRRQDDAV AALRDAQQTF TAQQREVERL ATERDSAQAR LEAARPVAAT AAAPSAAQPG
TVPVSGAPWD RGTTSPGGAT KGGLWDTTLP MVPSANVAGD PVAIINAVLK IMATSAQLTA
DMGRKFLTKL GILSPVTAAA DPGITNGRIP RLYGRQASEF VIRRAMSQLG VPYSWGGGNA
NGPSRGIDQG ANTVGFDCSG LMLYAFAGVG IKLDHYSGSQ YNAGRKIPSS QMRRGDLIFY
GPNASQHEAM YLGDGMMIEA PYTGSVVKIS PVRTSGMTPY VTRLIEY