Gene Mjls_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4448 
Symbol 
ID4881566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4676733 
End bp4678007 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content61% 
IMG OID640141757 
Productphage integrase family protein 
Protein accessionYP_001072710 
Protein GI126437019 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.322677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGGC CTCCGGACAA CGAAGCGGAT GAGGGGAGCG GAGTACTGCG GTACTTTCAG 
CGTATGACGA CTCGAAACGA GCGAGCGGGA ATTGACGACC GCTGGCACAA ACGAGTCAAG
GCGCCGGACG GCGCGATGCG CACTGAGCGG TCTGCGGTAT ATGGCAAGGT GTCGCGATGG
CGTGTCAGGT GGGTTGACGC CAGTGGAGCC GAGCGCACCA AGAGTTTCCA GCGTAAGCCG
GATGCGCAGG CCTACCTAAA TGGGCTGACC GCCGATGTGC AGCGCGGCGA GTATGTCGAT
CCGCGGAAGA GTGCGGAGAC TTTCGGATCG GTGGCCGAGC AGTGGTTCGC CACCAAACAG
CACCGCAAGC CGAAAACCGT TGCCGGATAT CGCTCGTTGC TCGACACTGT GGTGCTGCCG
AAGTGGGAAA GTGTTCAGCT GAAAAGAATT AATTACGAAT CATATTCAAC GTGGCTAGGG
GCGCTGTCAG TCGACGGCGG GCAACGCGGA ACCGGCCTGT CGGCAAGTCG GATCACCCAA
GCTCATCAGC TGGTAGGCGC TGTCCTGAAG TACGCCCAAC GGACTGGCAA GGTGGCGAAG
AACGTCGCGT TCGAGATCAA GCGGGACGAA GATCTTCCCG AGCAAGGCGA GCGTGAGCGG
CGCTATCTGA CCCATGCCGA GCTGCTAATG CTGGCGAAGG CTGCTGATCG GTTCGAGACG
CTGACGCTCG TTCTCGGGTA CTGCGGACTG AGGTTCGGCG AAGCCGTTGC GTTGCGCCGC
CGGCATGTGG GGGATCGGAT GCTGACGGTG CGCTCGTCCG CAACAGCCGT CACCGGTAAG
GGCATCGTGG AGTCAACGAC TAAGACGAAG CGGGATCGTC ACGTGCCTGT GCCCGAACCG
GTTTGGAAAA AGCTAAAGGC CGAGCTGCCC GCCGACCCCA ACGCGCTGGT CTTTCCCAGC
CGAAAGGGCG GGTTCCTTCC ACTTGGCGAA TACCGCTGGG CGTTCGACAA CGCGTGTGCT
GATATCGGCA TCGACGGGCT GGTACCGCAC GGGCTGAGAC ACACCACGGC GTCACTGGCG
ATCAGTGCAG GCGCTAACGT CAAGGTCGTG CAGAGACTGC TTGGGCACGC GACCGCCGCG
ATGACGCTCG ACCGCTACGG CCATCTTCTC AATGACGATT TGAGCGGTGT GGCGGACGCC
CTGGGGAAGG CTATCGACAG CACTGCGGTA TTACTGCGGT ATTCAGAGCA TCGTGACGAG
GCGGAAAGGG CCTAA
 
Protein sequence
MVRPPDNEAD EGSGVLRYFQ RMTTRNERAG IDDRWHKRVK APDGAMRTER SAVYGKVSRW 
RVRWVDASGA ERTKSFQRKP DAQAYLNGLT ADVQRGEYVD PRKSAETFGS VAEQWFATKQ
HRKPKTVAGY RSLLDTVVLP KWESVQLKRI NYESYSTWLG ALSVDGGQRG TGLSASRITQ
AHQLVGAVLK YAQRTGKVAK NVAFEIKRDE DLPEQGERER RYLTHAELLM LAKAADRFET
LTLVLGYCGL RFGEAVALRR RHVGDRMLTV RSSATAVTGK GIVESTTKTK RDRHVPVPEP
VWKKLKAELP ADPNALVFPS RKGGFLPLGE YRWAFDNACA DIGIDGLVPH GLRHTTASLA
ISAGANVKVV QRLLGHATAA MTLDRYGHLL NDDLSGVADA LGKAIDSTAV LLRYSEHRDE
AERA