Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4409 |
Symbol | |
ID | 4880114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 4644257 |
End bp | 4644952 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640141717 |
Product | ABC transporter related |
Protein accession | YP_001072671 |
Protein GI | 126436980 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.805429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.364973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA CCGTCGGGCT GACAAAGAGT TACCGGAGGC GCACAGCCGT CGCGGACGTC TCGCTCACGT TCCCGAGCGG GGCGGTCACC TACCTGCTCG GGCTCAACGG GGCCGGCAAG ACCTCGCTGC TGCGTCTGGT CGCCGGGCTG ACCACCGCCG ACAGCGGTTG GGTCAGCATC TGCGGCAGGC AACTGCACCG GGAACGAGAT CCGATGCGCC TGCTGGGCTC GTCGCTCGAA CCCGGAGTGA TGAACCCCCG TCACACGGTG CGCAGGCACC TGAACTGGCT CGCCACGCTC GGCGGCCTTC CCGGCGCCCG AGTCGATGCG GTGCTGGCCG AGACGGATCT GACTAGTGCT GCAAGGCAAC GTATCTCGTC CTTGTCGCTC GGCGCGCGCC AGCGGGTGGC GATCGCAGGC GCGCTCCTCG GCGATCCCGC GGCGGTGGTG CTCGACGAAC CGCTCAACGG GCTTGACGTA CCCGGCATCG TCTGGCTGCG TGAACTGCTG CGGCGGCTGG CGGCCGACGG ACGCACCCTC GTCGTCGCGA GCCACCTTCT CTCCGAGGTG GTCCTGACCG CCGACCGGAT CGTCGTCCTG CAGAACGGCC GGGTGGCGCT GGATGCGCCG TTCGGCGATC TGACCCGCGC CGGGTCCGAT CCGCGTGAAC ATCTCGAACG AATCGTGGTG GGGTGA
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Protein sequence | MIETVGLTKS YRRRTAVADV SLTFPSGAVT YLLGLNGAGK TSLLRLVAGL TTADSGWVSI CGRQLHRERD PMRLLGSSLE PGVMNPRHTV RRHLNWLATL GGLPGARVDA VLAETDLTSA ARQRISSLSL GARQRVAIAG ALLGDPAAVV LDEPLNGLDV PGIVWLRELL RRLAADGRTL VVASHLLSEV VLTADRIVVL QNGRVALDAP FGDLTRAGSD PREHLERIVV G
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