Gene Mjls_4356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4356 
Symbol 
ID4880061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4591797 
End bp4593503 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content72% 
IMG OID640141664 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_001072618 
Protein GI126436927 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.641048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.232825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CGATCGGTCC CGACGAGCCG CGCGGGCCGG GTCCGCTGCG CGACACGCTG 
TCGGGGCTGC GGCTGCGCGA ACTGCTCACC GAGGTGCAGG ACCGCATCGA GATGATCGTC
GAGGGCCGCG ACCGCCTCGA CGGCCTGGTC GACGCGATGC TCGTCGTCAC GGCGGGCCTC
GAACTCGACG TCACACTGCG CACCATCGTG CACACCGCCA TCCAGCTCGT CGATGCCCGC
TACGGCGCGC TCGGGGTGCG CGGGCACGGC CACGATCTCG TCCAATTCAT CTACGAGGGC
ATCGACGACG GCACCCGCGA CCTGATCGGG CACCTCCCCG AGGGGCGCGG CGTGCTCGGC
GTGCTCATCG ACGATCCGCG CCCGATCCGG CTCGACGACA TCCGCCACCA CAGCGCGTCG
GTCGGGTTCC CGGCCAACCA TCCGCCGATG CGGACGTTCC TCGGTGTGCC GGTGCGGATC
CGCGACGAGG TGTACGGCAA CCTCTACCTG ACCGACAAGG TCGGCGGGCA GCCGTTCACC
GAGGAGGACG AGGTGCTCGT GCAGGCGCTC GCCGCCGCGG CGGGTATCGC CATTGACAAC
GCCCGCCTCT ACGAACAGGC CAGGGCGCGG CAGGCGTGGA TCGCCGCGAC GCGCGACATC
GCCACCGAGA TGCTCTCCGG TGCCAGCCCG GCCACCGTGT TCCGCAGGGT GGTCGATCAG
GCGCTGACGC TCACCGGCGC GGACGGCACG CTGGTCGCGG TGCCCGGCGA CACCGAGGCC
CCACCCGACC AGGTCCACGA CCTGGTGGTG GTCGAGTCCG CGGGAATGTT CACCGGTGCC
GCGGTCACCG TCGCGCTCGA CGAATCCCCG ATCGGGCTGG CGTTCCGCAA GCGCACCCCG
GTGCGGGTGG ACCGGCTCAC CCTGGGATCG GCGGAATGCG GTGCGGCCCT TGTGCTCCCG
CTTCGCGCCG CTGACACGGT CGCCGGTGTG CTGGTGGCGG CGCGGGTTCC CGGCGCCCAG
GGGTTCACCG CCGAACAACT CGACGTGACG GCCGCGTTCG CCGACCAGAT GGCGCTGGCA
TGGCAGCTGG CGAGTTCGCA GCGGCGCATG CAGGAACTCG AGATCCTCAC CGACCGCGAC
CGCATCGCCC GCGACCTGCA CGACCACGTC ATCCAACGGC TGTTCGCGGT CGGTCTGTCG
CTGCAGGGCA CCTTGGCCCG GGTGCGCGAC GCCGACGTGC AGCAGCGGTT GGCGGGCAAC
GTCGACGACC TCCAGGCGGT GATCCAGGAG ATCCGCACCA CGATCTTCGA CCTGCACGGC
GGTTCGTCGG GGGCGACCCG TCTGCGCCAA CGCCTCGACG AGGCGATCGG GCAGTTCGCC
GGCGCCCGGT TGCACACCAC CGCGCAGTTC GTCGGACCGC TGTCGGTGGT CGACGCGACG
CTGGCCGACC ATGCCGAGGC GGTGGTGCGC GAAGCGGTCA GCAACGCCGT CCGGCACGCC
AGGGCGACCG AGTTGACGGT GCGGGTCACC GTCGCCGACG ACCTGTGCAT CGAGGTGGCC
GACAACGGCT GCGGGATCGA CGGGTCGATC ACAGAGAGCG GCCTGGGCAA CCTGCGCGCT
AGGGCCGAGG ACGCCGGCGG CACGTTGACC CTCGGTGAGA GCGCCGGCGG CGGAACGCTG
CTGCGGTGGT GTGCGCCGCT GGCGTGA
 
Protein sequence
MTEPIGPDEP RGPGPLRDTL SGLRLRELLT EVQDRIEMIV EGRDRLDGLV DAMLVVTAGL 
ELDVTLRTIV HTAIQLVDAR YGALGVRGHG HDLVQFIYEG IDDGTRDLIG HLPEGRGVLG
VLIDDPRPIR LDDIRHHSAS VGFPANHPPM RTFLGVPVRI RDEVYGNLYL TDKVGGQPFT
EEDEVLVQAL AAAAGIAIDN ARLYEQARAR QAWIAATRDI ATEMLSGASP ATVFRRVVDQ
ALTLTGADGT LVAVPGDTEA PPDQVHDLVV VESAGMFTGA AVTVALDESP IGLAFRKRTP
VRVDRLTLGS AECGAALVLP LRAADTVAGV LVAARVPGAQ GFTAEQLDVT AAFADQMALA
WQLASSQRRM QELEILTDRD RIARDLHDHV IQRLFAVGLS LQGTLARVRD ADVQQRLAGN
VDDLQAVIQE IRTTIFDLHG GSSGATRLRQ RLDEAIGQFA GARLHTTAQF VGPLSVVDAT
LADHAEAVVR EAVSNAVRHA RATELTVRVT VADDLCIEVA DNGCGIDGSI TESGLGNLRA
RAEDAGGTLT LGESAGGGTL LRWCAPLA