Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4356 |
Symbol | |
ID | 4880061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 4591797 |
End bp | 4593503 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640141664 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_001072618 |
Protein GI | 126436927 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.641048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.232825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC CGATCGGTCC CGACGAGCCG CGCGGGCCGG GTCCGCTGCG CGACACGCTG TCGGGGCTGC GGCTGCGCGA ACTGCTCACC GAGGTGCAGG ACCGCATCGA GATGATCGTC GAGGGCCGCG ACCGCCTCGA CGGCCTGGTC GACGCGATGC TCGTCGTCAC GGCGGGCCTC GAACTCGACG TCACACTGCG CACCATCGTG CACACCGCCA TCCAGCTCGT CGATGCCCGC TACGGCGCGC TCGGGGTGCG CGGGCACGGC CACGATCTCG TCCAATTCAT CTACGAGGGC ATCGACGACG GCACCCGCGA CCTGATCGGG CACCTCCCCG AGGGGCGCGG CGTGCTCGGC GTGCTCATCG ACGATCCGCG CCCGATCCGG CTCGACGACA TCCGCCACCA CAGCGCGTCG GTCGGGTTCC CGGCCAACCA TCCGCCGATG CGGACGTTCC TCGGTGTGCC GGTGCGGATC CGCGACGAGG TGTACGGCAA CCTCTACCTG ACCGACAAGG TCGGCGGGCA GCCGTTCACC GAGGAGGACG AGGTGCTCGT GCAGGCGCTC GCCGCCGCGG CGGGTATCGC CATTGACAAC GCCCGCCTCT ACGAACAGGC CAGGGCGCGG CAGGCGTGGA TCGCCGCGAC GCGCGACATC GCCACCGAGA TGCTCTCCGG TGCCAGCCCG GCCACCGTGT TCCGCAGGGT GGTCGATCAG GCGCTGACGC TCACCGGCGC GGACGGCACG CTGGTCGCGG TGCCCGGCGA CACCGAGGCC CCACCCGACC AGGTCCACGA CCTGGTGGTG GTCGAGTCCG CGGGAATGTT CACCGGTGCC GCGGTCACCG TCGCGCTCGA CGAATCCCCG ATCGGGCTGG CGTTCCGCAA GCGCACCCCG GTGCGGGTGG ACCGGCTCAC CCTGGGATCG GCGGAATGCG GTGCGGCCCT TGTGCTCCCG CTTCGCGCCG CTGACACGGT CGCCGGTGTG CTGGTGGCGG CGCGGGTTCC CGGCGCCCAG GGGTTCACCG CCGAACAACT CGACGTGACG GCCGCGTTCG CCGACCAGAT GGCGCTGGCA TGGCAGCTGG CGAGTTCGCA GCGGCGCATG CAGGAACTCG AGATCCTCAC CGACCGCGAC CGCATCGCCC GCGACCTGCA CGACCACGTC ATCCAACGGC TGTTCGCGGT CGGTCTGTCG CTGCAGGGCA CCTTGGCCCG GGTGCGCGAC GCCGACGTGC AGCAGCGGTT GGCGGGCAAC GTCGACGACC TCCAGGCGGT GATCCAGGAG ATCCGCACCA CGATCTTCGA CCTGCACGGC GGTTCGTCGG GGGCGACCCG TCTGCGCCAA CGCCTCGACG AGGCGATCGG GCAGTTCGCC GGCGCCCGGT TGCACACCAC CGCGCAGTTC GTCGGACCGC TGTCGGTGGT CGACGCGACG CTGGCCGACC ATGCCGAGGC GGTGGTGCGC GAAGCGGTCA GCAACGCCGT CCGGCACGCC AGGGCGACCG AGTTGACGGT GCGGGTCACC GTCGCCGACG ACCTGTGCAT CGAGGTGGCC GACAACGGCT GCGGGATCGA CGGGTCGATC ACAGAGAGCG GCCTGGGCAA CCTGCGCGCT AGGGCCGAGG ACGCCGGCGG CACGTTGACC CTCGGTGAGA GCGCCGGCGG CGGAACGCTG CTGCGGTGGT GTGCGCCGCT GGCGTGA
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Protein sequence | MTEPIGPDEP RGPGPLRDTL SGLRLRELLT EVQDRIEMIV EGRDRLDGLV DAMLVVTAGL ELDVTLRTIV HTAIQLVDAR YGALGVRGHG HDLVQFIYEG IDDGTRDLIG HLPEGRGVLG VLIDDPRPIR LDDIRHHSAS VGFPANHPPM RTFLGVPVRI RDEVYGNLYL TDKVGGQPFT EEDEVLVQAL AAAAGIAIDN ARLYEQARAR QAWIAATRDI ATEMLSGASP ATVFRRVVDQ ALTLTGADGT LVAVPGDTEA PPDQVHDLVV VESAGMFTGA AVTVALDESP IGLAFRKRTP VRVDRLTLGS AECGAALVLP LRAADTVAGV LVAARVPGAQ GFTAEQLDVT AAFADQMALA WQLASSQRRM QELEILTDRD RIARDLHDHV IQRLFAVGLS LQGTLARVRD ADVQQRLAGN VDDLQAVIQE IRTTIFDLHG GSSGATRLRQ RLDEAIGQFA GARLHTTAQF VGPLSVVDAT LADHAEAVVR EAVSNAVRHA RATELTVRVT VADDLCIEVA DNGCGIDGSI TESGLGNLRA RAEDAGGTLT LGESAGGGTL LRWCAPLA
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