Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4268 |
Symbol | |
ID | 4879973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 4512271 |
End bp | 4514145 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640141576 |
Product | extracellular solute-binding protein |
Protein accession | YP_001072530 |
Protein GI | 126436839 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.475057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGACCC GTCCCCGCCG CCACCGCGTG ACGTTGGGGG CGTTAGTCTC TGCCGTCGCA CTGCTGCTCG GTGGGTGCAC CGTGAGCCCG CCGCCGGCAC CGCAGAGCAC CGAGACGCCG CAGACCACCC CGCCGCCGGC GCCCAAGGCC ACCCAGATCA TCGTCGCGAT CGATTCGATC GGTCCGGGGT TCAACCCGCA TCTGCTGTCG GATCAGTCGC CGGTCAACGC GGCGATCGCC GCCCTGGTGC TGCCGAGTTC GTTCCGGCCG ATCCCGGATC CGAACACGCC GACCGGATCG CGGTGGGAGC TGGACCCGAC GCTGCTGGAA TCGGCCGAGG TGACCAACGA GAACCCGTTC ACCGTCACCT ACAACATCCG GCCCGAGGCG CAGTGGACCG ACAACGCGCC GATCGGCGCC GACGACTACT GGTATCTGTG GCGTCAGATG GTCAGCCAGC CCGGCGTCGT GGACCCCGCC GGCTACGACC TGATCACCGG GGTGCAGTCC GTCGAGGGCG CCAAGCAGGT CGTCGTCACG TTCTCCCAGC CCTACCCCGC GTGGCGCGAG CTGTTCAACA ACATCCTGCC CGCGCACATC GTCAAGGACG TGCCCGGCGG TTTCGGAGCG GGTCTGGCCG AGGCGATGCC GGTGACGGGC GGACAGTTCC GGGTGGAGAG CATCGATCCG CAGCGTGACG AGATCCTGCT GGCCCGCAAC GACCGGTACT GGAGTGCACC CGCCAAACCC GACCTCGTGC TGTTCCGCCG CGGCGGTGCC CCGGCGGCGC TGGCGGACTC GATCCGCAAC GGTGACACCC AGGTCGCCCA GGTGCACGGC GGCGCAGCGA CCTTCGCGCA ACTGAGCGCG ATCCCGGATG TGCGCACGGC CCGCATCGTG ACGCCGCGGG TCATGCAGGT GACGCTGCGC GGTCAGCTGC CCAAACTCGC CGATCCGTCG GTTCGCCGGG CGATCCTCGG CCTGCTCGAC GTCGACCTGC TGGCGTCGGT GGGTGCCGGC GACGACAACA CCGTCACCCT GGCCCAGGCG CAGGTGCGCT CACCGTCCGA TCCCGGGTAT GTGCCGACGG CCCCACCCGC GCTGGGCACC GAGGCGGCCC TCGAACTACT GGCCGAGGCG GGCTATCAGA TGGCGCCGGT GGGGGATGGC GCACCGGGGG CTCCCGCACC GGACCACAGT CGCGGACGCC TCTCGAAAGA CGGTGCCCCG CTCACCCTGG TGCTCGGGGT GGCCGCCAAC GATCCGACGT CGGTCGCCGT GGCGAACACC GCCGCCGACC AACTCCGCAG TGTCGGCATC GAGGCGTCGG TGCTGGCGCT GGATCCGGTG AAGCTCTACG GGGAGGCGCT GGCCGAGAAC CGGGTCGACG CCGTCGTGGG GTGGCACCAG GCCGGGGGAG ACCTGGCCAC CGCGCTGGCC TCCCGGTACG GCTGTCCCGC GCTGGAGGCG ACGCCCGTGC AGACCGCGCC TGCGGCGCCG CCCGGATCGT CGCGGCCGAC CACGACCGCG GCTCCGGCGA CGACGGCTCC CGCCACCCCG ACGGCCACCC CCACCACCAC ACCCAGCCCC GCACCGGAAT CCGGCGCGCT GGTGCAGGCG CCGAGCAACA TCACCGGAGT GTGTGACCGC AGCATCCAGC CGAAGATCGA CGCGGCCCTC GACGGCAGCG AACCGATCGC CGAGGTGATC GACGCCGTCG AGCCACGGCT GTGGAACATG TGGACGGTGT TGCCGATCCT GCAGGACACC ACGATCGTCG CGGCGGGGCC GAGCGTGCGC AACGTGAGCC TCACGGGGGC CGTGCCGGTC GGCATCGTCG GCGATGCAGG CAGTTGGGTG AAAACCCCGC AGTGA
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Protein sequence | MPTRPRRHRV TLGALVSAVA LLLGGCTVSP PPAPQSTETP QTTPPPAPKA TQIIVAIDSI GPGFNPHLLS DQSPVNAAIA ALVLPSSFRP IPDPNTPTGS RWELDPTLLE SAEVTNENPF TVTYNIRPEA QWTDNAPIGA DDYWYLWRQM VSQPGVVDPA GYDLITGVQS VEGAKQVVVT FSQPYPAWRE LFNNILPAHI VKDVPGGFGA GLAEAMPVTG GQFRVESIDP QRDEILLARN DRYWSAPAKP DLVLFRRGGA PAALADSIRN GDTQVAQVHG GAATFAQLSA IPDVRTARIV TPRVMQVTLR GQLPKLADPS VRRAILGLLD VDLLASVGAG DDNTVTLAQA QVRSPSDPGY VPTAPPALGT EAALELLAEA GYQMAPVGDG APGAPAPDHS RGRLSKDGAP LTLVLGVAAN DPTSVAVANT AADQLRSVGI EASVLALDPV KLYGEALAEN RVDAVVGWHQ AGGDLATALA SRYGCPALEA TPVQTAPAAP PGSSRPTTTA APATTAPATP TATPTTTPSP APESGALVQA PSNITGVCDR SIQPKIDAAL DGSEPIAEVI DAVEPRLWNM WTVLPILQDT TIVAAGPSVR NVSLTGAVPV GIVGDAGSWV KTPQ
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