Gene Mjls_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4229 
Symbol 
ID4879934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4466005 
End bp4467159 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content66% 
IMG OID640141537 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001072491 
Protein GI126436800 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.308919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAC TCGCGCAGCC CCTGGAGGGC ATCACGGTGG TCACTCTCGA GCATGCGGTG 
GCCGCGCCTT TCGCGACGCG GCAGCTTGCG GACCTAGGGG CCCGGGTGAT CAAGGTGGAA
CGCCCCATGG TCGGCGACTT CGCCCGGACC TATGACCGGA CGGTGCACGG CGAATCGAGC
TACTTCGTCT GGCTCAACCG TGGTAAGGAA AGCGTCGAGA TCGACATCAA GGACGCCGCC
GATCGCCGAT TGCTCGACAA CCTCATCGAC CGTGCCGACG TCTTCGTTCA AAATCTCGGC
CCTGGGGTAG TCGACCGGAT CGGCCTGGAC GCTTCGACGC TGCGCGCACG CCGCCCCGGC
CTCATCCACT GCTCGATATC CGGTTACGGA CCCGGCGGCC CATACACGTC GAAGAAGGCC
TACGACTTGC TCATCCAATG TGAGGCCGGA CTGCTCGCCA CCACGGGAAC AGCAGACACC
CCGTCGAAGG TCGGTATCTC CATCGCCGAC ATCGCCACCG GTATGTACGC CTACACCGGC
ATCCTGACGG CGCTCTACAC GCGCGGGCGC ACCGACGAAG GTGCCACGAT CGACGTCGCG
ATGCTCGATG CATTGGGCGA ATGGATGATG CAACCCGTGT ACTTCAGCGT CTACGGAAGT
CAACCGACGC GACGCACCGG GGCGCGGCAT GCCTCGATCG CTCCCTACGG GCCGTATCGA
GTGGGCGAAA CTTCAACGGT GTTCTTGGGA GTGCAGAACG ACCGTGAGTG GAAAGCGTTG
TGTGAGCGCG TCATCAACCG CCCGGAACTC GTCGAAGACG AGCGGTTCGC CACCAATACG
GCGCGGGTCA CCAATGACGC CGAGATCACG GGACTCCTCG AAGAGGCATT CCGCGCGAGC
ACCGCAGACG ATGTGACAGC GCGCCTGGAC GCGGCCGGTA TCGCCTGCGC GGAGTTGCGC
AGCCCGGCCG GCTTCGCCCA ACACCCTCAA CTCGCGGCCA GGAACCGCTG GCGCGCAGTG
GCCACCGCAG GAGGGACGGT GAACGCGTTG CTTCCGCCGG TCACGATCGC CGGGCATGAG
GCACCGATGC GGCCGGTGCC GCGACTCGGT GAGCACAACC CCGCCATACG TGCCGAGTTC
GGCACGACCC GCTGA
 
Protein sequence
MTGLAQPLEG ITVVTLEHAV AAPFATRQLA DLGARVIKVE RPMVGDFART YDRTVHGESS 
YFVWLNRGKE SVEIDIKDAA DRRLLDNLID RADVFVQNLG PGVVDRIGLD ASTLRARRPG
LIHCSISGYG PGGPYTSKKA YDLLIQCEAG LLATTGTADT PSKVGISIAD IATGMYAYTG
ILTALYTRGR TDEGATIDVA MLDALGEWMM QPVYFSVYGS QPTRRTGARH ASIAPYGPYR
VGETSTVFLG VQNDREWKAL CERVINRPEL VEDERFATNT ARVTNDAEIT GLLEEAFRAS
TADDVTARLD AAGIACAELR SPAGFAQHPQ LAARNRWRAV ATAGGTVNAL LPPVTIAGHE
APMRPVPRLG EHNPAIRAEF GTTR