Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4015 |
Symbol | |
ID | 4879723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 4246860 |
End bp | 4247675 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640141326 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001072280 |
Protein GI | 126436589 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.196171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGATTA TTGTCACCGG CGGGAACAGC GGCGTCGGAC GGGCGACCGC TAGCGCGATG GCTGCCGAAG GACACGAGGT CGTGATCGCT TGCCGGACGA TGAGCAAGGG ATACGACGCC GCCGCGTCGA TGTCCGGCAG AGTCGATGTG CGTGAGCTGG ACCTCGCCGA CCTCACCAGC GTCCGTAAGT TCGCCGACAC CGTCGACTAC GTCGACGTGC TTGTCAACAA CGCCGGCGTC CTCGGCCTGC CGTTGACTCG CACCGCCGAC GGTTTCGAGG CGCACATGGG CACCAACCAC CTCGGCCACT TCGCGCTGAC GTGCCTACTG GGCGACCGGA TCCGCGATCG GGTGGTGTCG GTCGCCAGCA CCAACTACAC CACCGCCCGC ATGCACTTCG ACGACCTCAA CTGGCAGCAG CGGAAGTACA ACCCGTGGTC GGCATACGGT GAGTCCAAGC TGGCGAACCT GTTGTTCGTG CACGAACTGG TCGCCAGGGG CAAGACCGCG TACGCCTCGG ACCCCGGGAT GACGAATACC GCGATCACGC GGGACGGCTC GGGGGTGCTG CAGTGGGCCG GCCGCGTCAT CTCCCCGCAT ATCGCCCAAA GTCCCGATGA CGGCGCCCGC TCGACCATCC AGGCGATCAC CACAACGTTG CCCAACGGAA CTTATCTGGC GCCGCGGGGC CTGATGCACC AGTGGGGCAA GCCCAAGCCG ACGAAGTTGA AGGCGAAGGC CCGCGACGCC GACAGCGCCC GGCGGCTGTG GGACCTGTCG GCCGAGTTGA CCGGATGCGC CTGGCAGGAG GCCTGA
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Protein sequence | MRIIVTGGNS GVGRATASAM AAEGHEVVIA CRTMSKGYDA AASMSGRVDV RELDLADLTS VRKFADTVDY VDVLVNNAGV LGLPLTRTAD GFEAHMGTNH LGHFALTCLL GDRIRDRVVS VASTNYTTAR MHFDDLNWQQ RKYNPWSAYG ESKLANLLFV HELVARGKTA YASDPGMTNT AITRDGSGVL QWAGRVISPH IAQSPDDGAR STIQAITTTL PNGTYLAPRG LMHQWGKPKP TKLKAKARDA DSARRLWDLS AELTGCAWQE A
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