Gene Mjls_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3984 
Symbol 
ID4879693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4213150 
End bp4215090 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content70% 
IMG OID640141296 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001072250 
Protein GI126436559 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.086459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.10455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCCA CGTCCGAAGC GCGACCGGTG ACCGGTGACC CATGGCATGC GCTGTGGGCC 
ATGATGGTCG GCTTCTTCAT GATCCTGGTC GACGCCACCA TCGTGGCGGT CGCCAACCCG
GTGCTCATGG AGAAGATGGG CGCCGACTAC GACGCGGTGA TCTGGGTGAC CAGCGCCTAT
CTGCTGGCCT ACGCGGTCCC GCTGCTGGTG GCGGGTCGGC TGGGGGACCG GTTCGGGCCC
AAGAACGTCT ACCTGGTCGG TCTGGCCGTC TTCACCGCCG CCTCGCTGTG GTGCGGGCTG
GCCGGGTCCA TCGACACGCT GATCGCCGCG CGGGTCGTCC AGGGCGTCGG CGCGGCGCTG
CTGACGCCGC AGACCCTGTC GACGATCACC CGCATCTTCC CGCCCGAGCG GCGCGGTGTG
GCGATGAGTG TGTGGGGTGC GACGGCCGGG GTGGCCACGC TGGTGGGGCC ACTGGCGGGT
GGCGTGCTGG TGGACCACCT CGGTTGGCAG TGGATCTTCT TCGTCAACGT GCCGGTCGGG
GTGGCGGGCC TTGCATTGGC GTTCTGGCGG GTGCCCGCGC TGACCACCAC CGCGCACCGG
TTCGACCTGC TCGGGGTGCT GCTGTCCGGG GTCGGGATGT TCGCGATCGT CTTCGGGCTG
CAGGAGGGGC AGTCCCACGG TTGGCAGCCC TGGATCTGGG TGGTCATCGT GGCCGGCGTC
GCGGTGATGG CCGGGTTCGT CTACTGGCAG TCGGTCAACC CCCACGAACC GTTGATCCCG
TTGCGGATCT TCGGTGACCG CGACTTCTCG CTGTCCAGCT TCGGCGTCGC CGTCATCGGC
TTCGTGGTGA CCGGCATGAT CGTGCCCGCG ATGTTCTTCG CCCAGGCGGT GTGTGGGCTG
TCGCCGACCG AGTCGGCGCT GCTGACCGCG CCGATGGCGA TCGCCAGTGG AGTGCTGGCA
CCCGCGGTCG GGCGCATCGT CGATCGCGCC CATCCGCGAC CGATCGTCGG GTTCGGGTTC
TCGGCGCTGG CGATCGGGCT GACCTGGTTG TCGATCGAGA TGACGCCGGA TACCCCGATC
TGGCGGCTGG TCCTGCCGTT CCTCGTAATG GGTATCGGTA TGGCGTTCAT CTGGTCGCCG
CTGGCGGCCA CCGCGACCCG GAATCTGGCA CCGCATCTCG CCGGCGCCGG GTCCGGCGTC
TACAACGCGA CGCGTCAGGT CGGGTCGGTG CTGGGCAGCG CCGGCATGGC GGCGTTCATG
ACGTCGCGGA TCAGCGCGGA GATGCCGTCG GCGCAGGGCG GGGCGCCGCG CGGGGAGGGG
GCGGTGTCGG CGCTCCCCGA ATTTCTCCAG GTGCCGTTCG CCGCGGCGAT GTCGCAGTCG
CTCCTGCTGC CGGCGTTCGT GGCGTTGATC GGGGTGGTCG CGGCGATCTT CCTGCGCGGC
TTCGGCGGGG CATCGGCGCC GGTTGTCGCC GCGCCGGTGG CGCGCGCCGA CCACCGGGAC
GACTCCGTCG ACGACAGCCA CGGCTATGAC GACGACGACT ACCTCGAGTA CGCGGTCAGC
TGGGACGACC TTCAGTTCAC CGAACCCATC TCGACCCGTC CTGAGGTCGG CGCCGACGAC
AGTGTCACGG CGCCTCTGGC AACGCGGGGC CGTCGCGCGG AGGCGGCCGC CGAGCCGTCC
GGTGCCGACG ATCCGTGGCG GCGTGTGCTC GACGAACTGC TACCGGAGCC GCCGGCCCGG
CCCGCGGCCG AACCGATCGG CTTCGCGCAC AACGGTTTCC ACGTCGAGGG AGAGGAGACG
CCGGTCGACG ACAGACGGGG CCGGCGATAC CGAGACGACG GCGACGCTGC ACCCGCATGG
CTGCGCGAGT TCGGTGAACG CTCGCGCCGC GGAACGGACA CCCCCTCCGG CGGCCGTCAT
TCACGCCGCG ACGGCGACTG A
 
Protein sequence
MFSTSEARPV TGDPWHALWA MMVGFFMILV DATIVAVANP VLMEKMGADY DAVIWVTSAY 
LLAYAVPLLV AGRLGDRFGP KNVYLVGLAV FTAASLWCGL AGSIDTLIAA RVVQGVGAAL
LTPQTLSTIT RIFPPERRGV AMSVWGATAG VATLVGPLAG GVLVDHLGWQ WIFFVNVPVG
VAGLALAFWR VPALTTTAHR FDLLGVLLSG VGMFAIVFGL QEGQSHGWQP WIWVVIVAGV
AVMAGFVYWQ SVNPHEPLIP LRIFGDRDFS LSSFGVAVIG FVVTGMIVPA MFFAQAVCGL
SPTESALLTA PMAIASGVLA PAVGRIVDRA HPRPIVGFGF SALAIGLTWL SIEMTPDTPI
WRLVLPFLVM GIGMAFIWSP LAATATRNLA PHLAGAGSGV YNATRQVGSV LGSAGMAAFM
TSRISAEMPS AQGGAPRGEG AVSALPEFLQ VPFAAAMSQS LLLPAFVALI GVVAAIFLRG
FGGASAPVVA APVARADHRD DSVDDSHGYD DDDYLEYAVS WDDLQFTEPI STRPEVGADD
SVTAPLATRG RRAEAAAEPS GADDPWRRVL DELLPEPPAR PAAEPIGFAH NGFHVEGEET
PVDDRRGRRY RDDGDAAPAW LREFGERSRR GTDTPSGGRH SRRDGD