Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3983 |
Symbol | |
ID | 4879692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 4209743 |
End bp | 4213174 |
Gene Length | 3432 bp |
Protein Length | 1143 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640141295 |
Product | RecB family-like nuclease |
Protein accession | YP_001072249 |
Protein GI | 126436558 |
COG category | [R] General function prediction only |
COG ID | [COG2251] Predicted nuclease (RecB family) |
TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0895851 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCGTCG AATCCGTTGG GGCGCACGAC GAGGCCATCT ACAGCGCTTC GGATCTGGCC GCCGCCGCGC GCTGCGAGTA CGCGCTGCTG CGTTCATTCG ACGCCCGGCT GGGATGGGGT CCGTCCGTGG CCACCGAGGA CGAGCTGCTG GCCCGCACCG CCGACCTGGG TGACGAACAC GAGAAGCGCC ACCTCGACAC ACTGAGGACC GACAGCGACC ACAACGTCAC CGTCATCGGC AGGCCGCCCT ACACCGTGGC CGGGCTGACC GCCGCCGCCG AGGCCACCAC CCGCGCCGTC GCCCGCCGCG CCCCGGTGAT CTACCAGGCC GCGATGTTCG ACGGCCGGTT CGCCGGTTTC GCCGACTTCC TGATCCTCGA GGGCGACCGC TACCTGCTGC GCGACACCAA GCTGGCGCGT TCGGTGAAGG TCGAGGCGCT GCTGCAGCTG GCCGCGTACG CCGAGGCGCT GACCGCGGCG GGGGTGCCGG TCGCCGACGA GGTGGAGCTC GTGCTCGGCG ACGGGGCCAC CGCCCGCTAT CCGCTCGAGG AACTGCTGCC GGTGTACCGG CCGCGGCGGG CCGCGCTGCA GCGGCTGCTC GACGACCATC TCGCCGGCGG GACGCCGGTG CGCTGGGAGG ACGAGACCGT CCGGGCGTGT TTCCGCTGTC CGGAGTGCAG CATCGAGGTG CGCGCACAGG ACGACCTGCT GCTCGTCGCG GGCATGCGGG TCAGCCAGCG CGCCCGGTTC CACGAGGCGG GGATCACCAC CGTGGCCGAA CTCGCCGCGC ACCAGGGTCC GGTGCCGGAA CTGCCGGCGC GCACCGTCAC CGCGTTGAGC GCCCAGGCCC GGCTGCAGAC CGCACCGCGC GTCGACGGCA AACCGCCCTA CGAGGTCGCC GATCCGCAGC CGCTGATGCT GCTCCCCGAA CCCGACAAGG GTGACCTCTT CTTCGATTTC GAGGGCGACC CGTTGTGGAC CGACGACGGC CACGAGTGGG GCCTGGAGTA CCTGTTCGGT GTGCTCGACA CCGCCGACGG GTTCCACCCG CTGTGGGCGC ATGACCGGCC GCAGGAACGG AAGGCGCTCG AGGACTTCCT CGAGTTGGTG CGCAAGCGGC GCAAACGCCA TCCGAACATG CACATCTACC ACTACGCCGC ATACGAGAAG ACCGCGCTGC TGCGCCTCGC CGGGCGCTAC GGCGTCGGTG AGGACGCGGT CGACGACCTG TTGCGCAGCG GGGTGTTGGT CGACCTGTAC CCGTTGGTGC GCAAGAGTTT TCGCATCGGC ACCGAGAACT ACAGCCTCAA GTCACTGGAG CCGCTGTACA TGGGTGGGCA GCTGCGCACC GGGGACGTGA CCACGGCCGC GGCGTCGATC ACCGAGTACG CCCGCTACTG CGAGCTGCGC GCCGAGGGCC GTGACGACGA CGCCGCCGTC GTCCTCAAGG ACATCGAGGA CTACAACCGT TACGACTGCA CCTCGACGCG CAAACTGCGC GACTGGCTGG TGTGCCGGGC CATCGACTGC GAGGTGCCGC CGCGGGGGCC GCAGCCGGTC CGCGACGGCG CCGAGCCCGA ACCCGTCGAC GCCCTCGACC GCACGCTGTG CCGTTACGCG GGCGACGAAC TGGAGGGCCG CACCCCGGAG CAGTCGGCGG TCGCGATGGT CGCCGCCGCC CGCGGCTACC ACCGTCGCGA GGACAAACCG TTCTGGTGGT CGCATTTCGA CCGGCTCAAC AACCCGGTCG ACGAATGGGC CGACAGCACC GACGTCTTCC TCGTCGACCC CGGCGGCGCA CAGGTCGAGG TGGATTGGCA CACGCCGCCG CGGGCCCGCA AACCGCAGCG CCGGGTCCGG TTGAGCGGCG CGATGGCCGC CGGCGGGCTC AGCCGCGACA TGTACGCCCT CTATGAACCG CCCGCCCCGG CCGGGCTCGG CGACGATCCG GACCGTCGCG CGGCGGGCAG CGTCACCGTC GTCGAGTGCA ACGCCCCCGA CGTCCCCACC GAAGTGGTCG TCGTCGAGCG CACCCCACGG GACGGCGGGG TGTTCGACCA GTTGCCCTTC GCGCTGGCGC CGGGGCCGCC GATCCGCACG ACCGCGCTGC GTGAATCGAT CGAGGCGACG GCCGCCGACC TGGCCGAGCG CCTCCCCCGG CTACCCGAAA CCGCGGTCAC CGACATCCTG CTGCGCCGCC CGCCGCGGAC CCGCAGCGGC GCCCCACTGC CCACCGGGCC CGACGTCTCG GCCGCGATCA CCGCCGCGCT GCTCGACCTC GACTCGTCCT ACCTGGCCGT GCACGGCCCA CCCGGCACCG GCAAGACGTT CACCGCGGCG GCCATCATCG CGACGCTGGT CAACACGCAC GGCTGGCGGA TCGGGGTGGT GGCGCAGTCA CATGCGGTGG TGGAGAACCT CTTCCGCGGG GTCATGGACG CGGGGGTGGA CGCGGCGCGG GTGGCCAAGA AACGGGGGCA CGGCGACGAC GCCAACTGGA CCGTACTCGA GGAGGCGGGG TTCCCCGGCT TCGTGGCGGA CCGCGACGGT TGCGTGATCG GCGGCACCGC TTGGGATTTC GCGAACGGCA ACCGGATTCC GCGCGGCTGC CTCGACCTGC TCGTCATCGA GGAGGCCGGG CAGTTCTGCC TGGCCAACAC GATCGCTGTG GCGCCGGCGG CGGCGAATCT GCTGCTGCTC GGTGACCCGC AACAGCTACC CCAGGTCAGC CAGGGCACGC ACCCCGAACC GGTCGACACC TCCGCGCTGG GGTGGCTGGT CGACGGTGCG CACACGCTGT CCGCCGAACG CGGCTACTTT CTCGACGTGT CCTGGCGGAT GCATCCGGCG GTGTGCGCGG CGGTGTCCCG GCTGTCCTAC GACGGGCGGC TGCAATCGAA TGAGGCGGTG ACCACCGCGC GCACGCTCGA GGGCTGGTCA CCCGGGGTGC ACGAGGTGAC CGTGCCCCAC GACGGCAACG CCACCGAAAG CCCGGAGGAG GCCGACGCGA TCATCGCGCG GATCGGCAGG TTGCTCGGTT CGGTGTGGAC CGACGAGAAG GGTTCCCGAC CGCTCGCACA GGACGACGTG ATGGTGGTGA CGCCGTACAA CGCCCAGGTG GTGCTGCTGC GCCAACGTCT CGACGCGGAA AGGCTGACCG ACGTGCGGGT GGGGACAGTC GACAAATTCC AGGGCCAGCA GGCGCCGGTG GTGTTCATCT CCATGGTGGC GTCCTCGATC GACGACGTGC CGCGGGGAAT CTCGTTCCTG CTCAACCGGA ATCGGCTCAA CGTGGCGATC AGCCGCGCGA AGTACGCCGC CGTGGTCGTG CGCTCGGAGG CCCTCACCGA GTACCTGCCT TCCACGCCGA AGGGACTGGT CGAACTCGGC GCGTTCCTGT CGTTGAGTCA GTCGCCGTCG CGGCGTGAAT GA
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Protein sequence | MFVESVGAHD EAIYSASDLA AAARCEYALL RSFDARLGWG PSVATEDELL ARTADLGDEH EKRHLDTLRT DSDHNVTVIG RPPYTVAGLT AAAEATTRAV ARRAPVIYQA AMFDGRFAGF ADFLILEGDR YLLRDTKLAR SVKVEALLQL AAYAEALTAA GVPVADEVEL VLGDGATARY PLEELLPVYR PRRAALQRLL DDHLAGGTPV RWEDETVRAC FRCPECSIEV RAQDDLLLVA GMRVSQRARF HEAGITTVAE LAAHQGPVPE LPARTVTALS AQARLQTAPR VDGKPPYEVA DPQPLMLLPE PDKGDLFFDF EGDPLWTDDG HEWGLEYLFG VLDTADGFHP LWAHDRPQER KALEDFLELV RKRRKRHPNM HIYHYAAYEK TALLRLAGRY GVGEDAVDDL LRSGVLVDLY PLVRKSFRIG TENYSLKSLE PLYMGGQLRT GDVTTAAASI TEYARYCELR AEGRDDDAAV VLKDIEDYNR YDCTSTRKLR DWLVCRAIDC EVPPRGPQPV RDGAEPEPVD ALDRTLCRYA GDELEGRTPE QSAVAMVAAA RGYHRREDKP FWWSHFDRLN NPVDEWADST DVFLVDPGGA QVEVDWHTPP RARKPQRRVR LSGAMAAGGL SRDMYALYEP PAPAGLGDDP DRRAAGSVTV VECNAPDVPT EVVVVERTPR DGGVFDQLPF ALAPGPPIRT TALRESIEAT AADLAERLPR LPETAVTDIL LRRPPRTRSG APLPTGPDVS AAITAALLDL DSSYLAVHGP PGTGKTFTAA AIIATLVNTH GWRIGVVAQS HAVVENLFRG VMDAGVDAAR VAKKRGHGDD ANWTVLEEAG FPGFVADRDG CVIGGTAWDF ANGNRIPRGC LDLLVIEEAG QFCLANTIAV APAAANLLLL GDPQQLPQVS QGTHPEPVDT SALGWLVDGA HTLSAERGYF LDVSWRMHPA VCAAVSRLSY DGRLQSNEAV TTARTLEGWS PGVHEVTVPH DGNATESPEE ADAIIARIGR LLGSVWTDEK GSRPLAQDDV MVVTPYNAQV VLLRQRLDAE RLTDVRVGTV DKFQGQQAPV VFISMVASSI DDVPRGISFL LNRNRLNVAI SRAKYAAVVV RSEALTEYLP STPKGLVELG AFLSLSQSPS RRE
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