Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3853 |
Symbol | |
ID | 4879563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 4074808 |
End bp | 4075479 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640141162 |
Product | hypothetical protein |
Protein accession | YP_001072120 |
Protein GI | 126436429 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1637] Predicted nuclease of the RecB family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00569345 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCGTCTCG TCATCGCCCA GTGCACGGTC GACTACGTCG GCCGGTTGAC CGCCCATCTG CCGTCCGCCC GCCGGCTGCT GCTGATCAAA TCCGACGGTT CGGTCAGCGT GCACGCCGAC GACCGGGCCT ACAAACCGCT GAACTGGATG AGCCCACCGT GTCGGCTGTC GGAGGAGTCC GGTGATCCGC ACCCCGTGTG GGTGGTGGAG AACAAGACCG GCGAGCAGCT GCGGATCACC GTCGAGGAGA TCGAACACGA CTCCAGCCAC GACCTCGGGG TGGATCCGGG GCTGGTCAAG GACGGTGTGG AGGCGCATCT GCAGAAGCTG CTGGCCGAAC ACGTCGAGCT GCTGGGCGCC GGTTACACGC TGGTGCGCCG TGAGTACATG ACCGCGATCG GGCCGGTCGA CCTGCTGTGC CGCGACGAGA CCGGTCGTTC GGTGGCCGTG GAGATCAAAC GCCGCGGTGA GATCGACGGG GTCGAACAGC TCACCCGCTA CCTCGAACTG CTCAACCGGG ACACCCTGCT GGCGCCGGTG TCCGGCGTGT TCGCCGCCCA ACAGATCAAA CCGCAGGCCC GCACGCTGGC CAACGATCGT GGGATTCGTT GTCTGATACT CGATTACGAC CAGATGCGCG GTATGGACAG CGACGAGTAC CGGCTGTTCT GA
|
Protein sequence | MRLVIAQCTV DYVGRLTAHL PSARRLLLIK SDGSVSVHAD DRAYKPLNWM SPPCRLSEES GDPHPVWVVE NKTGEQLRIT VEEIEHDSSH DLGVDPGLVK DGVEAHLQKL LAEHVELLGA GYTLVRREYM TAIGPVDLLC RDETGRSVAV EIKRRGEIDG VEQLTRYLEL LNRDTLLAPV SGVFAAQQIK PQARTLANDR GIRCLILDYD QMRGMDSDEY RLF
|
| |