Gene Mjls_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3782 
Symbol 
ID4879492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4003925 
End bp4004773 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content68% 
IMG OID640141090 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001072049 
Protein GI126436358 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.25135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACTA GACCCAATGA CGAACTGCAA GGGCGGGTCG CGATCGTCAC CGGTGGCGCG 
TCGGGGATCG GCCGCGGCGT CGCCGAACGG TTCGTCGCCG AGGGCGCCAA GGTCGTGATC
GCCGACGTGC AGGACGAACT CGGCGAGGCG CTGGCAGAAC AGTGCGGGCC GAACGCCCTG
TTCCACCACA CCGATGTGGG CGACCAGGAA CAGATGCGCC GGCTGGTGGA CGTCGCGGTG
GAGCGGTTCG GGGCGCTGGA CGTCATGGTC AACAACGCCG GGATCTCCAG CCCGTTGCGG
CGCGGCCTGT TCAACGAGGA TCTCGAGGAG TTCGACCGGG TGATGCGGGT GAACCTGCTC
AGCGTCATGG CCGGTACCCG CGATGCGGGG CGGTACATGT CCGAGCACGG CGGCGGGTCG
ATCATCAACC TGTCCTCGAT CGGCGGGATC CAGGCCGGTG GCGGGGTACC GGTGTACCGC
GCGTCGAAGG CGGCCATCCT GCACTTCACC AAGTGTGCGG CGATCGAGTT GGCGCACTAC
GACATCCGCG TGAACTGCAT CGCCCCGGGC AACATCCCGA CACCGATCCT GCAGAGCTCG
GCCACCGGGG AGGACCGCGA ACGTCTCGAG AAGTTCGAGG CCAGGATCCG CGCGCAGATG
CGCAACGACC GGCCGCTCAA ACGCGAGGGC ACCCCCGACG ACGTCGCCGA AGCCGCGCTC
TACCTGGCCA CCGATCGCTC GCGCTACGTC ACCGGCATCG TGCTGCCCGT GGAAGGCGGG
ACCATCGCCG GAAAGATCAT CCCGCGCAAG GCCGAGCCCG GAGCGACGGT CAACGGCGCC
CAGACGTGA
 
Protein sequence
MVTRPNDELQ GRVAIVTGGA SGIGRGVAER FVAEGAKVVI ADVQDELGEA LAEQCGPNAL 
FHHTDVGDQE QMRRLVDVAV ERFGALDVMV NNAGISSPLR RGLFNEDLEE FDRVMRVNLL
SVMAGTRDAG RYMSEHGGGS IINLSSIGGI QAGGGVPVYR ASKAAILHFT KCAAIELAHY
DIRVNCIAPG NIPTPILQSS ATGEDRERLE KFEARIRAQM RNDRPLKREG TPDDVAEAAL
YLATDRSRYV TGIVLPVEGG TIAGKIIPRK AEPGATVNGA QT