Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3782 |
Symbol | |
ID | 4879492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 4003925 |
End bp | 4004773 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640141090 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001072049 |
Protein GI | 126436358 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.25135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCACTA GACCCAATGA CGAACTGCAA GGGCGGGTCG CGATCGTCAC CGGTGGCGCG TCGGGGATCG GCCGCGGCGT CGCCGAACGG TTCGTCGCCG AGGGCGCCAA GGTCGTGATC GCCGACGTGC AGGACGAACT CGGCGAGGCG CTGGCAGAAC AGTGCGGGCC GAACGCCCTG TTCCACCACA CCGATGTGGG CGACCAGGAA CAGATGCGCC GGCTGGTGGA CGTCGCGGTG GAGCGGTTCG GGGCGCTGGA CGTCATGGTC AACAACGCCG GGATCTCCAG CCCGTTGCGG CGCGGCCTGT TCAACGAGGA TCTCGAGGAG TTCGACCGGG TGATGCGGGT GAACCTGCTC AGCGTCATGG CCGGTACCCG CGATGCGGGG CGGTACATGT CCGAGCACGG CGGCGGGTCG ATCATCAACC TGTCCTCGAT CGGCGGGATC CAGGCCGGTG GCGGGGTACC GGTGTACCGC GCGTCGAAGG CGGCCATCCT GCACTTCACC AAGTGTGCGG CGATCGAGTT GGCGCACTAC GACATCCGCG TGAACTGCAT CGCCCCGGGC AACATCCCGA CACCGATCCT GCAGAGCTCG GCCACCGGGG AGGACCGCGA ACGTCTCGAG AAGTTCGAGG CCAGGATCCG CGCGCAGATG CGCAACGACC GGCCGCTCAA ACGCGAGGGC ACCCCCGACG ACGTCGCCGA AGCCGCGCTC TACCTGGCCA CCGATCGCTC GCGCTACGTC ACCGGCATCG TGCTGCCCGT GGAAGGCGGG ACCATCGCCG GAAAGATCAT CCCGCGCAAG GCCGAGCCCG GAGCGACGGT CAACGGCGCC CAGACGTGA
|
Protein sequence | MVTRPNDELQ GRVAIVTGGA SGIGRGVAER FVAEGAKVVI ADVQDELGEA LAEQCGPNAL FHHTDVGDQE QMRRLVDVAV ERFGALDVMV NNAGISSPLR RGLFNEDLEE FDRVMRVNLL SVMAGTRDAG RYMSEHGGGS IINLSSIGGI QAGGGVPVYR ASKAAILHFT KCAAIELAHY DIRVNCIAPG NIPTPILQSS ATGEDRERLE KFEARIRAQM RNDRPLKREG TPDDVAEAAL YLATDRSRYV TGIVLPVEGG TIAGKIIPRK AEPGATVNGA QT
|
| |