| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3679 |
|---|
| Symbol | |
|---|
| ID | 4879390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 3903551 |
|---|
| End bp | 3905245 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640140988 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_001071947 |
|---|
| Protein GI | 126436256 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.794076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCC GCTTTGTACG AACCCAGCTG ATCATCTTCA CCATCGCCTC GATCGTCGGC
GTGTCGGTGA TGATCTTCGC GTACATGAAG GTTCCCACCC TGCTCGGTAT CGGCCGCTTG
ACGGTGACGC TGGAATTGCC TGCGGCCGGT GGGCTCTACC GCTTCAGCAA TGTGACCTAC
CGGGGTGTCC AGATCGGCAA GGTCATGGGA GTGAACCTGA CCGAGAACGG CGCAGAGGCC
ACGATGTCGC TCGACACCTC GCCCAAGGTC CCCGCGGATC TGTTGGCCGA GGTGCGCAGC
GTGTCCGCGG TCGGTGAGCA GTACGTGGAG CTGTTGCCCC AAACCGACTC GGGGCCTTAC
CTGGAGGACG GCTCGCGAAT CTCCAGGGAC AAGACCACCA TTCCGCAAGA GGTGGGTCCC
ATGTTGGACC AGCTGAGCGC GCTGGTGGAC AGTATCCCGA GCGATAGAAT CCCCGATCTG
CTCGACGAGA CGTTCAAGGC CCTCAACGGC GCCGGCCCTG ACTTCCAGTC ACTTCTGGAC
TCGGCCTCGA AGGTGGCGGG TGACGCCAAC TCCGTCTCCG ACCAGACGCG AAGACTCATC
GATGACGTTG GGCCACTGTT GGATTCGCAG GCGGAATCCA CCGAGGCGAT CCGGACGTGG
GCGCGCAGTC TGGCCGGGGT CACCGAACAA CTCGTCCAGA ACGACCCCGA ACTGCGCACG
GTCCTGCAGC AGGGACCCGG CTTCGCGCAG GAGGTTTCGC AGCTCCTCAC CCAGATCAAG
CCGACGTTGC CGATATTGCT GGCGAATCTG ACCAGCGTGA CTCAGGTTCT GCTCACCTAC
AATCCGGCGC TCGAGCAACT CTTGGTGATC TTTCCGGGAA TCATCGCCGC ACAGCAGTCA
TTCGGGCTCC CGCAGAACAA TCCGACCGGC CTCCCTTCGG GTGACTTCGC GCTCACCATC
AGCGACCCGG TGGCGTGTAC AGTCGGCTTC CTGCCGCCCT CGCAGTGGCG GAGCCCGGAG
GACATGACGA CGGTCGACAC GCCTGACGGG CTGTACTGCA AGTTGCCGCA GGACTCGCCG
ATCAGCGTCC GTGGTGCCCG CAACTACCCG TGTATCGAGC ACCCCGGCAA GCGGGCGCCG
ACGGTCGAAC TCTGCAACGA CCCCAAGGGA TATCAGCCAC TCGCGATCCG TGAGCACAGT
CTTGGTCCGT ATCCCTTCGA CCCGAATCTG GTCTCGCAGG GCGTCCCGGT CGACGACCGG
GTGGATTTCC AGGACCGGAT CTACGCCCCG CTACAGGGCA CACCGCTACC CCCGGGCGCG
GTTCCGGCGG GCACACCGCC AGTCGCCCCT CCGCCCGGCG CGCCGGCCCC GGCAACGACG
CCGGTCCCCG CAGCGCCGCC CGCCCCCACA GCGGCGCCGG CCGCGGTGGC GCCTCCGCCA
CCGCCCGGCA ACTCGATCAA CGGGACGCCC CTTCCGCCTG TACCGCCCGC GGCGGCCGAA
GTGCCTCCCA GCGGCGGTGC GGTCCCCGCT GCGCCGAGCG CCTTCGGCGG CAACGGAACG
GGGGGACCGT CACTTGCGGT GGCGCACTAT GACCCGGCCA CCGGCGAGTA CCTGACCCCC
GGCGGGCGAC TGGAGCGCCA GACGAATTCC GCTCTGCGAG CGCCCAAGTC ATGGCAGGAC
CTGTTGCCGA CCTGA
|
|---|
| Protein sequence | MLTRFVRTQL IIFTIASIVG VSVMIFAYMK VPTLLGIGRL TVTLELPAAG GLYRFSNVTY
RGVQIGKVMG VNLTENGAEA TMSLDTSPKV PADLLAEVRS VSAVGEQYVE LLPQTDSGPY
LEDGSRISRD KTTIPQEVGP MLDQLSALVD SIPSDRIPDL LDETFKALNG AGPDFQSLLD
SASKVAGDAN SVSDQTRRLI DDVGPLLDSQ AESTEAIRTW ARSLAGVTEQ LVQNDPELRT
VLQQGPGFAQ EVSQLLTQIK PTLPILLANL TSVTQVLLTY NPALEQLLVI FPGIIAAQQS
FGLPQNNPTG LPSGDFALTI SDPVACTVGF LPPSQWRSPE DMTTVDTPDG LYCKLPQDSP
ISVRGARNYP CIEHPGKRAP TVELCNDPKG YQPLAIREHS LGPYPFDPNL VSQGVPVDDR
VDFQDRIYAP LQGTPLPPGA VPAGTPPVAP PPGAPAPATT PVPAAPPAPT AAPAAVAPPP
PPGNSINGTP LPPVPPAAAE VPPSGGAVPA APSAFGGNGT GGPSLAVAHY DPATGEYLTP
GGRLERQTNS ALRAPKSWQD LLPT
|
|---|
| |