Gene Mjls_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3645 
Symbol 
ID4879356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3853768 
End bp3854415 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID640140952 
Productoligoribonuclease 
Protein accessionYP_001071913 
Protein GI126436222 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.710746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGACG AACTGGTGTG GATCGACTGC GAGATGACCG GCCTGGATCT GAGGTCGGAT 
CTGCTCATCG AGATCGCGGT GCTGGTCACC GATGCCGACC TGAACATCCT CGGCGACGGG
CTCGACGTGG TGATCCACGC GCCCGACGAG GCGCTCGACG CCATGATCCC GGTGGTGACC
GAGATGCACA CCCGCTCGGG GCTGATCGAG GAGGTGCGTG CCTCCACGGT CGACCTCGCG
ACGGCCGAGG AGATGGTGCT CGACTACATC CGCGGGCACG TCAAACAGGC CAAGACGGCG
CCGCTGGCCG GGAACTCGAT CGCCACCGAC CGCGGGTTCA TCGCCCGCGA CATGGCCAAA
CTCGACGACT ATCTGCACTA CCGAATGATC GACGTCAGCT CGATCAAGGA GTTGTGCCGC
CGGTGGTATC CGCGGATCTA CTTCGGTCAG CCCGAGAAAG GTCTTGCGCA CCGCGCGCTG
GCCGACATCC ACGAGTCGAT CCGCGAGCTG AAGTACTACC GGCAGACGGC GTTCGTCGCT
CCGCCCGGCC CGTCGACCAG CGATATCGCC GCGATCGCCG CCGAGCTCGG CCCGCCCGGC
AAGGACGCGG CGGATACCGA TTCGGCCGCA GGGCACACGA CCGGTTAA
 
Protein sequence
MRDELVWIDC EMTGLDLRSD LLIEIAVLVT DADLNILGDG LDVVIHAPDE ALDAMIPVVT 
EMHTRSGLIE EVRASTVDLA TAEEMVLDYI RGHVKQAKTA PLAGNSIATD RGFIARDMAK
LDDYLHYRMI DVSSIKELCR RWYPRIYFGQ PEKGLAHRAL ADIHESIREL KYYRQTAFVA
PPGPSTSDIA AIAAELGPPG KDAADTDSAA GHTTG