| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3586 |
|---|
| Symbol | |
|---|
| ID | 4879297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 3782188 |
|---|
| End bp | 3784542 |
|---|
| Gene Length | 2355 bp |
|---|
| Protein Length | 784 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640140892 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001071854 |
|---|
| Protein GI | 126436163 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5434] Endopolygalacturonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCAGTC AGTCATGTCG CGCGGGAGGT GCGGCGCTGG CGGTGGGTAT CGGCATGCTC
CTCGCGCCAG GGATCGCGGC AGCAGACCCC TCCGCCGACG CGGCAGGCAC CGATGTCTCC
GCGCATGCAC CGGCCGACAC CCGGCAAGAC GACCACACCG AGAAAGCCGA CGAGGAAACG
GACGCCCCCG AAGACAACGC GGAGGACATC CCCGAGGACA GCGCGGAGGA CGAAGCGGAG
GACGAAGATA CCGACGCGAA AACCGGCCAC CGCGACGCGG ACGACGAAGA ACCCACCGAG
GATCCCGTCG ACGAACCCGT TGCGGACGAC CCCGTTGCGG ACAATGAAGA CGATCCAGAA
GAACCCGCCG AATGGCCCGC GCCCGTCGCG ACGCTCACCG ACACTGTCGG CGCCGGCGGC
ACGCCTGCCC CGGTCGAGTC ACCCGCGACG TGGGCCGTAC TCGCCTGGGC CCGCCGCCAA
CCGTTCAGCA CCACCACGGC CGCGCACACA TCCGCCAGGC ACACGACCGC GTCATCCTCG
ACGGCGACGC CGGCCACGAC CGTCGACGTC AGGGACTACG GCGCGGTCGG CGACGGCGTC
ACCGACGACT CGGCGGCGAT CAAGGCCGCC GAGGCCGCGC TGGCCTCCGG CCAGCGTCTC
CACTTCCCCG AGGGGAGTTA CCGGTTCGCC CAGCAGAACC CGAATGGCGG CGCGGCGGTC
CTACTCAAGG GTCTCTCCGA CGTCACGGTG GAGTTCGCAC CGTGCGCCCG GCTACTGATG
GACAACCTCG ACGCCGCCGG GCACGGCACC AGCCACGGCA TCCGCGTCGA GGGCGCGGCG
TCGAACGTGA CGATCCTCAA CGCCACGATC GAGTGGAAGA CCCGACCGTC TGCGCGCAGC
TTCGGCGACG GGTTCTCGAT CCTCGGGTGG GCGTCGAACA CCCCGCCCCC GCCGGGTTGG
ACCGGATCGA CCGGAACGGT CTCCAACGTG TCGCTCGTCA ACGCCACGGT GATCAACGCG
CCGCAGACCG GCGCGATCTT CATGGGCGCC TCCGACGTGA CCGTCACGAA CTTCACGGCG
ATCGGCACGC TGGCCGACGG GTTGCACTTC AACGCGAACC GCCGGGTGAC CGTGCACGGG
CTCCTCGCGC AGAACACCGG CGACGACGGC CTGGCGTTCG TCACCTACTA CGACCCGACC
CTGCCGTGGA CGTACGGGCC CGGCGACGGC CCGTTCAACC AGCCCGGCCT CGGCGAGTGG
AACAACGGCG GTTCGGTGGC GACGAACATC ACCGTGACGG GTGGGGCGGC CAGCGGGGTG
CGCGTCCAGG GTGGTTACGA CATCACGATC ACCGATGTCA CCGTGACCGG TAAGGAGTTC
GGCCTCCAGG TCAACTCCGC CAAGGCCACC GGTCCGGGCG ACTGGACGAG TCTGGCGTCG
CGCGACATCG CCGTCTCCGA TGTGACCATC AGCGATACCG TGACAGGAAT CGTCCTGGCC
ACCAACAACA TCGACGGCAC CGAGGCCTCC ATGTGGTGGG ACTTCTCGGG CCTGACGATC
AGCGACGTCA CCATCCACAA CTCCCGCAAC TGGTCGCTAG CCGTCGAGAC GCCGGCGAGC
ACCACGAGCA GATTCGCCGG CGTCACCCTG CGCAACATCC ATGCCGAAGT CGACGCGGAC
GTCGGCCCAC TCGGCGGCGG CAACGGCGGC ATCCTGCTTG CGTCGCTTCG GGATTCCGTG
ATCGACGGTG TGCGCCTGGT GTCGGTCCAC GGTAGCGACA TCAACGTCGT CGGCGCGGCT
CAGATCCGCA GTCAGTACAG CGTCGCCGAT CTGCCGTCGT CGAACCTGAC GATCGACGAT
CTGGTCCTCG AGGGCCCGGG TCGGATCCTG ATCCAGGACA TCGCCGGCCT GGACGTCGGG
GCTGTGGCGT CCCACGGCGC CAACAGCGCC GCCATCGAAC TCTTCCGCGT CAAGTCCGCC
TCGTTCGACA CCATCGGGGC GTACCTGCCC GGCCGCGGCA ACGGGGCGGG CTGGGGCGTA
CGGCTGCTGC AGGTCCACGA CCTCGACGTG GCGAACATCG AGGTGATCAC CGACGACCAC
ATCGGAACAT CCTGGTGGGC AGTGGAACTC GGCGGTGGCA ATCCTGCACA GGACATCGCC
GGTGCCGGTG TGCGCATCGA CAACATCACC TACGTCAGCG GTCGTGACGC CACGGACTCC
GACATCGTGG TCCAGGGTGG ACCGTACGGA CCGGTGGACT GGTACATCAA CGCAACCTGG
CTCCACGAGG GCGAGGCGTC GCCGCTGTGG CGCGCCGGTC TGTGGGGCGA CGCGATCCCC
CCGCTCACAT CCTGA
|
|---|
| Protein sequence | MVSQSCRAGG AALAVGIGML LAPGIAAADP SADAAGTDVS AHAPADTRQD DHTEKADEET
DAPEDNAEDI PEDSAEDEAE DEDTDAKTGH RDADDEEPTE DPVDEPVADD PVADNEDDPE
EPAEWPAPVA TLTDTVGAGG TPAPVESPAT WAVLAWARRQ PFSTTTAAHT SARHTTASSS
TATPATTVDV RDYGAVGDGV TDDSAAIKAA EAALASGQRL HFPEGSYRFA QQNPNGGAAV
LLKGLSDVTV EFAPCARLLM DNLDAAGHGT SHGIRVEGAA SNVTILNATI EWKTRPSARS
FGDGFSILGW ASNTPPPPGW TGSTGTVSNV SLVNATVINA PQTGAIFMGA SDVTVTNFTA
IGTLADGLHF NANRRVTVHG LLAQNTGDDG LAFVTYYDPT LPWTYGPGDG PFNQPGLGEW
NNGGSVATNI TVTGGAASGV RVQGGYDITI TDVTVTGKEF GLQVNSAKAT GPGDWTSLAS
RDIAVSDVTI SDTVTGIVLA TNNIDGTEAS MWWDFSGLTI SDVTIHNSRN WSLAVETPAS
TTSRFAGVTL RNIHAEVDAD VGPLGGGNGG ILLASLRDSV IDGVRLVSVH GSDINVVGAA
QIRSQYSVAD LPSSNLTIDD LVLEGPGRIL IQDIAGLDVG AVASHGANSA AIELFRVKSA
SFDTIGAYLP GRGNGAGWGV RLLQVHDLDV ANIEVITDDH IGTSWWAVEL GGGNPAQDIA
GAGVRIDNIT YVSGRDATDS DIVVQGGPYG PVDWYINATW LHEGEASPLW RAGLWGDAIP
PLTS
|
|---|
| |