Gene Mjls_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3378 
Symbol 
ID4879090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3541640 
End bp3542902 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content68% 
IMG OID640140681 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_001071647 
Protein GI126435956 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0742651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGT TAACCAGGCT TTCGACGGGG AACGGTTTCC CCAACGTGGT CGTCACGGGA 
GTTGCCATGA CGACCGCCCT GGCTACCGAT GCGGAGACCA CCTGGCAGCG TCTACTCGAC
GGGCAGAGCG GTATCCGCAC GCTCGAGGAT CCGTTCGTCG AGGAGTACGA CCTCCCGGTC
CGGATCGGCG GGCATCTGCT GGAGGACTTC GACAGTGAGC TCACGCGTGT CGAGCTGCGC
CGTCTGTCCT ACCTGCAGAA GATGTCGACC GTGCTGGGCC GGCGGGTCTG GGCGAACGCC
GGTTCCCCGG AGGTCGACCC GCGTCGGCTG ATGGTCTCGA TCGGCACGGG CATGGGCTCC
ACCGAGGAGC TCGTGTTCAG CTACGACGGG ATGCGTGCCA AGGGTCTCAA GGCCGTGTCA
CCGTTGGCCG TGCAGATGTA CATGCCCAAC GCGGCCGCCG CCGCGGTGGG TCTGGAGCGC
AAGGCCAGGG CCGGGGTCAT CACCCCGGTC TCGGCCTGCG CCTCCGGCTC CGAGGGCATC
GCCCAGGCCT GGCGCAACAT CGTGCTGGGC GAGGCCGACA TCGCGATCTG CGGCGGTGTC
GAGACCCGGA TCGAAGCGGT GCCGATCGCG GGGTTCGCGC AGATGCGCAT CGTGCTGTCG
ACCACCAACG ACGATCCGGC CGGCGCCTGC CGCCCGTTCG ACAAGGACCG CAACGGCTTC
GTCTTCGGCG AGGGCGGTGC GCTCCTGGTC ATCGAGACCG AGGAACACGC CAAGGCCCGC
GGCGCCAACA TCCTGGCCCG CATCATGGGT GCGAGCGTCA CCTCGGACGG CTACCACATC
GTGGCGCCGG ACCCCAACGG TGAACAGGCC GGGTGGGCCA TGACCCGCGC CATCCAGCTG
GCCGGTCTGC AGCCGACCGA CATCGACCAC GTCAACGCGC ACGCCACCGG CACCAGTGTC
GGTGACGTCG CCGAGGGCAA GGCGATCAAC AACGCGATGG GCGGTCACAA ACCGGCGGTC
TACGCACCCA AGGGCGCGCT CGGCCACTCG GTCGGCGCCG TCGGCGCGGT GGAGTCCATC
CTGACGGTGC TGGCGCTCAA GAACGGCGTC ATCCCCCCGA CCCTCAACCT GAAGAACCTG
GATCCGGAGA TCGACCTCGA CGTCGTCGCC GGCTCTCCGC GCCCCGGTAA CTACCAGTAC
GCGATCAACA ATTCGTTCGG ATTCGGTGGG CACAACGTCG CGCTCGCTTT CGGGAAGTAC
TGA
 
Protein sequence
MARLTRLSTG NGFPNVVVTG VAMTTALATD AETTWQRLLD GQSGIRTLED PFVEEYDLPV 
RIGGHLLEDF DSELTRVELR RLSYLQKMST VLGRRVWANA GSPEVDPRRL MVSIGTGMGS
TEELVFSYDG MRAKGLKAVS PLAVQMYMPN AAAAAVGLER KARAGVITPV SACASGSEGI
AQAWRNIVLG EADIAICGGV ETRIEAVPIA GFAQMRIVLS TTNDDPAGAC RPFDKDRNGF
VFGEGGALLV IETEEHAKAR GANILARIMG ASVTSDGYHI VAPDPNGEQA GWAMTRAIQL
AGLQPTDIDH VNAHATGTSV GDVAEGKAIN NAMGGHKPAV YAPKGALGHS VGAVGAVESI
LTVLALKNGV IPPTLNLKNL DPEIDLDVVA GSPRPGNYQY AINNSFGFGG HNVALAFGKY