| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3091 |
|---|
| Symbol | |
|---|
| ID | 4878804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 3228598 |
|---|
| End bp | 3229176 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640140391 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001071361 |
|---|
| Protein GI | 126435670 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0742554 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAACTGC ACAAACGCGA TGTGGTCGAT GCCGCGACGG TGATCCTGGA CTCCCACGGG
ATCGCCGATC TGACGATGCG CCGGCTCGCC CGCGAGCTCA ACGTCTCCCC CGGCGCCCTG
TACTGGCACT TCGCCAACAA ACAACAACTC CTCGGCGCGA TCGCGGACCG CATCCTGACC
CCGGCGCGCG GGCTGCCCGC CGAGGCGGAC TGGCGCGACC GCATCGTCGC GGTGTGTTCG
GCGCTGCGCG ATGCGCTGCT GTCGCACACC GACGGGGCCG AACTCGTCTC CGCCAGCTTC
GCCGCCGGAC AGTCGGAGGC CGCGGGCGAG ATCCTCGCGG TGCTCTCCGC TGCGGCCGCG
GACGCGGGTG TCGCCGCCGG TGAGGCCGAA CTCGCCGCGC GCACCGTCAT CTACTACGTC
CTCGGATTCA CCGTCGACGA GCAGTCGAAG CTGCAATGGG ACTCCGCCGG CGTGCTCGAC
CCCGACGAGT CGGTCGCCAC CATCGACCAC GACCGCCGCT TCGGCTTCGG TCTGCGGCTG
CTGATCGACG GTCTCGGGGT CATCTCACCG GTCAGGTGA
|
|---|
| Protein sequence | MQLHKRDVVD AATVILDSHG IADLTMRRLA RELNVSPGAL YWHFANKQQL LGAIADRILT
PARGLPAEAD WRDRIVAVCS ALRDALLSHT DGAELVSASF AAGQSEAAGE ILAVLSAAAA
DAGVAAGEAE LAARTVIYYV LGFTVDEQSK LQWDSAGVLD PDESVATIDH DRRFGFGLRL
LIDGLGVISP VR
|
|---|
| |