Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3059 |
Symbol | |
ID | 4878772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 3195321 |
End bp | 3196829 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640140359 |
Product | glutamate synthase (NADH) small subunit |
Protein accession | YP_001071329 |
Protein GI | 126435638 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.519079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.394132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGATC CCACCGGATT CCTGAAGGTG CCCAAGGTCG AAGCCGCCAA GCGGCCTGTC GACGAGCGCG TCGGCGACTG GCACGAAGTG TACGAACGTC AGAGCCTGCC CGAGCGTGCC GAAGAGGTCT CGCAGCAGGC ACGGCGCTGT ATGGACTGCG GAATCCCGTT CTGCCACTCC GGTTCCGCCG GCTGCCCGCT GGGGAACCTG ATCCCCGAGT GGAACGACCT GGTGCGCCGG GGACGCTGGG ACGCCGCCAG CGAACGCCTG CACGCCACCA ACAACTTCCC GGAGTTCACC GGACGGCTGT GCCCGGCGCC GTGCGAGGCG GCCTGCGTGC TCTCGATCAG CGAGGACCAC ACCGGCGGCA GCGTCACGAT CAAACGCATC GAGAACACGA TCGCCGATCA GGCGTGGGCG CTGGGCCTCG TCGACCCTCA ACCGGCGTCG ATCCGCACCG GTAGGCGGGT CGCCGTCGTG GGCTCCGGTC CTGCGGGTCT CGCTGCGGCC CAACAGCTCA CGCGCGCCGG ACACGACGTC ACGGTCTTCG AACGCGACGA CCGCATCGGC GGGCTCATGC GTTACGGCAT CCCCGAGTAC AAGCTGGAGA AGAGGACCCT CGACCAGCGG TTGGCGCAGA TGCGCGCGGA GGGCACCCGG TTCGTCACCG AGTGCGAGGT GGGCGTCGAC CTGACCGTGG AACAACTGCG AGAACGGCAC GACGCCGTGG TCCTGGCTGT CGGTGCGCTG CGCGCCAGGG ACAACGACGT CGAGGGCCGC CACCTCGACG GTGTGCACCT GGCGATGGAG CACCTGGTGC CGGCCAACAA GGAATGCGAG GGTGACGGCC CGTCCGCGCT GTCCGCGCGG GACAAGCACG TCGTGATCAT CGGCGGCGGG GACACCGGCG CGGACTGCCT GGGCACCGCG CACCGCCAGG GGGCGGCGTC GGTCACCCAA CTCGACTACA ACCCGGAACC GCCGGAGACC CGTGACGACA CCCGCACGCC GTGGCCGATG TGGCCGCTGG TGTTGCGGAC CCGGCTGTCG CCGGCGCACG CCGAGGGTGG ACAGCGCCGC TATCAGGTTG CGGTCCAGCG CTTCCTGGGT GACGAGCAGG GGCGCGTACG GGGCATGGAG ATCGCCGAGG TCAAGGTGGA ACGCGACGCC GAGGGCCGCA GGCAGATCGT GCCCGTCGGC GAGACGCTCG AGATCCCCTG CGATATGGCC TTGCTCGCGA TCGGATTCGA GGGCGTCGAG CACATGCCCC TGCTCGACGG GCTCGGACTG AGCCTGAACA ATCGCGGCGC GCTGCCCTGC GGCAGTGACT GGCAGACCGA TGCGCCCGGG GTGTTCGTCT GTGGCGACGC CCACCGCGGC GCATCGCTGA TCGTGTGGGC GATCGCCGAA GGCCGCAGCG CCGCCCACGC CGTCGACGCG TATCTGATGG GGGAGTCCGA CCTGCCGGCG CCGGTGCGAC CCGGCGCGCT GCCACTGGCC GTCGTCTGA
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Protein sequence | MADPTGFLKV PKVEAAKRPV DERVGDWHEV YERQSLPERA EEVSQQARRC MDCGIPFCHS GSAGCPLGNL IPEWNDLVRR GRWDAASERL HATNNFPEFT GRLCPAPCEA ACVLSISEDH TGGSVTIKRI ENTIADQAWA LGLVDPQPAS IRTGRRVAVV GSGPAGLAAA QQLTRAGHDV TVFERDDRIG GLMRYGIPEY KLEKRTLDQR LAQMRAEGTR FVTECEVGVD LTVEQLRERH DAVVLAVGAL RARDNDVEGR HLDGVHLAME HLVPANKECE GDGPSALSAR DKHVVIIGGG DTGADCLGTA HRQGAASVTQ LDYNPEPPET RDDTRTPWPM WPLVLRTRLS PAHAEGGQRR YQVAVQRFLG DEQGRVRGME IAEVKVERDA EGRRQIVPVG ETLEIPCDMA LLAIGFEGVE HMPLLDGLGL SLNNRGALPC GSDWQTDAPG VFVCGDAHRG ASLIVWAIAE GRSAAHAVDA YLMGESDLPA PVRPGALPLA VV
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