Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3008 |
Symbol | |
ID | 4878721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 3141585 |
End bp | 3142274 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640140306 |
Product | phage SPO1 DNA polymerase-related protein |
Protein accession | YP_001071278 |
Protein GI | 126435587 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00780326 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGACCA AGGTGCCCGG CGCAGAGGAC TTCGTTCCCG ACACCCGCGA CGTGTCGATC CTCGCCGATG CGGTGCAGGC GTGCCGCGGG TGCGAACTCT ATCGCGATGC GACGCAGGGC GTCTTCGGGC AGGGCAGTGC GGACGCGACC GTCATGTTCG TCGGCGAGCA ACCCGGTGAT CGGGAGGACC GCGCCGGGGA ACCGTTCGTC GGCCCGGCGG GCAGACTCCT CGACAAAGCG CTCGTGTCCG CGGGTATCGA CCGGGACGGG GTCTACGTCA CCAACGCCGT CAAACACTTC AAATTCACAC TGCCCGAACG CGGCAAGCGC CGTATCCACA AGACCCCCAG CCGTACCGAG GTCGTGGCGT GCCGGCCGTG GTTGCTCGCC GAATTGGACG CCGTGCGGCC GGAAGTCGTG GTGCTGCTCG GCGCGACAGC AGCGAAAGCT CTGCTGGGCA ACGACTTTCG GTTGACCGCG CGCCGCGGGG AAGTGCTGGC CCTGCCGCCT GTCACCGAGC CGGCCGATCT GGACGTCGAC CCGGCAGTGG TGGCGACGGC GCATCCGTCA TCGGTGCTGC GGGGACCGGC CGAGAATCGA CAGCAGGCGT TCGACGCACT CGTCGAGGAT CTACGCGTCG TCGCCCGGTT GATGCGCGGC GACCGTCAGC GGCGGTCGCG GCCGAAGTAG
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Protein sequence | MPTKVPGAED FVPDTRDVSI LADAVQACRG CELYRDATQG VFGQGSADAT VMFVGEQPGD REDRAGEPFV GPAGRLLDKA LVSAGIDRDG VYVTNAVKHF KFTLPERGKR RIHKTPSRTE VVACRPWLLA ELDAVRPEVV VLLGATAAKA LLGNDFRLTA RRGEVLALPP VTEPADLDVD PAVVATAHPS SVLRGPAENR QQAFDALVED LRVVARLMRG DRQRRSRPK
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