| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2786 |
|---|
| Symbol | |
|---|
| ID | 4878500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 2893855 |
|---|
| End bp | 2895903 |
|---|
| Gene Length | 2049 bp |
|---|
| Protein Length | 682 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640140081 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001071057 |
|---|
| Protein GI | 126435366 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGTT CACCCGCACC CACCGCAGCA CCGCCGGAGG CCGGCAGCGC GTTGATCAGC
CCGCAGCGGC GCAACCTGAT CTTCGTCGCG GTGCTGCTCG GGATGCTGCT CGCCGCGCTC
GACCAGACGA TCGTCGCGAC GGCGCTTCCG ACCGTCGTGG CCGATCTCGG CGGTGCCGGG
CACCAGAGCT GGGTGGTGAC GAGCTACCTG CTGGCCTCGA CGATCGTCAC CGCGATCGTC
GGCAAGCTCG GCGACATGTT CGGCCGCAAG ACCGTCTTCC AGGCGGCGGT GGTGTTCTTC
CTCGCCGGTT CGGTGCTGTG CGGGCTCGCG GGTTCGATGG GCATGCTGGT GGCTGCACGC
GCGCTGCAGG GTGTCGGCGG CGGCGCGCTC ATGGTGACCG CCATGGCGCT CATTGGCGAG
GTCATCCCGC TGCGGGACCG CGGCCGCTAC CAGGGTGCGC TGGGCGCCGT CTTCGGTGTC
ACCACCGTCA TCGGCCCGCT GCTGGGCGGC TTCTTCACCG ACCACCTGAG CTGGCGCTGG
GCGTTCTGGA TCAACGTGCC GGTGGGCATC GTGGTGTTCT TCGTGGCCGC CGCGGCAATC
CCCGCGCTGA GCCGGGTCGG CCGGGCCAAG ATCGACTACG CAGGCATCGT CTTCGTCGGC
CTTGGCGCCT CCGGCCTGAC ATTGGCGACG AGCTGGGGCG GGGCGGAGTA CGCCTGGACG
TCGCCGGTCA TCATCGGCCT GTTCGTCGCC TCCGCGCTGG CGCTGGCGGT GTTCATCCAG
GTCGAGCGAC GCGCTGCCGA ACCGATCCTG CCGATGCGGT TGTTCGCCAG CCCCGTGTTC
ACGGTCTGCT GCATCCTGTC GTTCATCGTC GGCTTCGCGA TGCTCGGGGC GCTGACCTTC
CTGCCCACCT TCATGCAATT CGTCGACGGC GTCTCGGCCA CCGAATCGGG GTTGCGCACG
CTGCCGATGG TGGCGGGTCT GCTCATCACC TCGACGGGCA GCGGGGCCAT CGTCGGCCGC
ACCGGGCGGT ACAAGATCTT CCCCGTCCTG GGCACCGCGA TCATGACGGT CGCATTCGTC
CTGCTGTCCC GGATGGACGC CACGACGCAC CTGCTGCAGC AGTCGCTGTA CCTCTTCATC
CTCGGCACCG GAATCGGGTT GTGCATGCAG GTGCTCGTGC TCACCGTGCA GAACACCGCC
ACCTTCGAAG ACCTCGGCGT CGCCACCTCC GGTGTGACGT TCTTCCGCAC CATCGGCAGC
TCGTTCGGTG CGGCCATCTT CGGGTCGCTG TTCGCCAACT TCCTCGACGA CCGGATCGGC
GCGGCACTGC TGAGCAGCGG TGCGCCCCCG GTCGCCGCCG AGTCCCCCCA GGCTCTGCAC
CGCCTGGCAC CCGATGTCGC TGCACCGATC GTCGACGCCT ACGCCGATTC GCTCGGTCTG
GTGTTCTTGT GCGCCGCCCC GATCGCGGCC GTCGGATTCC TGGTGGCGCT GCTGCTCAAA
GAGGTGCCGC TGCGGGAGAT GGAGACCGGC ACCGCCGTGG ATCTCGGCGA GGGGTTCGCG
ATGCCGGGTG CCGAATCCCC CGAGCAGATG CTCGAATCCG CGGTGGGCCG GATGCTGCGC
CACTCGCCCG ACATCCGGTT GCGGTCGGTG GCCGGGCGGC CGGGCTGCGA ACTCGACGTC
GCGCGGCTGT GGGCGCTGCT GCAGATCTAC CGCCACAACC AGGTTTTCGG TTCTGCCCGG
TTGAGCGAGA TCGCCGACCG GCTGCGCATC CCGTGCGAGG TGGTCGAACC GGTCTTCGAC
GATCTGGTGG CCGGCGGGTA CGCCGTGCGG ACCGGGGATC TGCTGTGGCT GAGTCAATCC
GGAGTCCGCC AGGTCGATGC CGTGTCGTCG GCGTTCGTCG GCATGATCGT CGACAAGCTC
GCGCAGTCAC CCACATTCGA GGGACGGCCC GACCGGTTGC AGGTGGAGGC GGCGCTGGAA
CGGATCACCC ACCGCATGCT CGTACAGCGC GACTGGGATT GGGACGACGA ACTCGAACGC
GCTCAGTGA
|
|---|
| Protein sequence | MASSPAPTAA PPEAGSALIS PQRRNLIFVA VLLGMLLAAL DQTIVATALP TVVADLGGAG
HQSWVVTSYL LASTIVTAIV GKLGDMFGRK TVFQAAVVFF LAGSVLCGLA GSMGMLVAAR
ALQGVGGGAL MVTAMALIGE VIPLRDRGRY QGALGAVFGV TTVIGPLLGG FFTDHLSWRW
AFWINVPVGI VVFFVAAAAI PALSRVGRAK IDYAGIVFVG LGASGLTLAT SWGGAEYAWT
SPVIIGLFVA SALALAVFIQ VERRAAEPIL PMRLFASPVF TVCCILSFIV GFAMLGALTF
LPTFMQFVDG VSATESGLRT LPMVAGLLIT STGSGAIVGR TGRYKIFPVL GTAIMTVAFV
LLSRMDATTH LLQQSLYLFI LGTGIGLCMQ VLVLTVQNTA TFEDLGVATS GVTFFRTIGS
SFGAAIFGSL FANFLDDRIG AALLSSGAPP VAAESPQALH RLAPDVAAPI VDAYADSLGL
VFLCAAPIAA VGFLVALLLK EVPLREMETG TAVDLGEGFA MPGAESPEQM LESAVGRMLR
HSPDIRLRSV AGRPGCELDV ARLWALLQIY RHNQVFGSAR LSEIADRLRI PCEVVEPVFD
DLVAGGYAVR TGDLLWLSQS GVRQVDAVSS AFVGMIVDKL AQSPTFEGRP DRLQVEAALE
RITHRMLVQR DWDWDDELER AQ
|
|---|
| |