| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2312 |
|---|
| Symbol | |
|---|
| ID | 4878032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 2412472 |
|---|
| End bp | 2413905 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640139613 |
|---|
| Product | gamma-aminobutyraldehyde dehydrogenase |
|---|
| Protein accession | YP_001070589 |
|---|
| Protein GI | 126434898 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00319664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.870052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGG TCAAGAACTT CATCGGCGGC GAACTCGTCG ACTCCGTCTC CGGCGCCACG
ATGCCGCTGG TGGATCCGTC CACCGGTGAG GAGTACGGGA CCGCCCCGGT GTCCAACGAG
GCCGACATCG ACAACGCCTA CGCGGCGGCG TCGAAGGCGT TCAAGGACTG GAAGCGGACC
ACCCCGGCGC AGCGGCAGAA GGCGCTGCTC GACTTCGCCG ACGAGGTCGA GAAGGCCGCC
GACGACCTGG TCACCGCCGA GGGCCGCAAC ACCGGCAAGC CCAACCACGT GACCATGGCC
GAGGAGATCC CGCCCATGGT CGACCAGATC CGGTTCTTCG CCGGGGCGGC GCGTGTCCTC
GAGGGCAAAT CCGCCGGCGA GTACATGGAG AACCACACGT CGTGGATCCG CCGGGAACCG
GTCGGTGTCA TCGGTCAGGT GGCGCCGTGG AACTACCCGA TGATGATGGC GATCTGGAAA
ATCTGCCCGG CGATCGCGGC GGGCAACACC GTCGTCATCA AACCCAGCGA CACCACGCCG
GTGACCACCG TGATGCTGGC CGAACTGGCG GCCAAGCATC TCCCGCCCGG GGTGCTCAAC
GTGGTGACCG GTGACCGCGT GACCGGTGCG AACCTCGTCG CCCACCCGAC GCCGGAGATG
GTGGCGATCA CCGGGTCGGT CGCCGCGGGC CGGGCGGTCG CGGTCAGCGC GGGGGGCCAC
CTCAAGCGCA CCCACCTCGA ACTGGGCGGC AAGGCGCCGG TGATCGTGTT CGACGACGCC
GACATCGCCG CGGCCGCCGA AGGTATCGCG ACGGCGGGTT ACTTCAACGC CGGTCAGGAC
TGCACGGCCG CCACGCGGGT GCTCGCCCCG GCGCGGATCG CCTCCGACCT CACCGATGCG
CTGGCCGAAC AGGCGAAGGC GGCGACGACG ACGTTCGGGC GCCCGGCCGA CGACGAGGAC
GCCTGGGTGC CACCGGTGAA CAACGTCAAC CAGCTCGACC GGGTACTGGG TTTCTTCGAC
GACGTGCCGT CGCACGCGAC GGTCGCCGTC GGTGGAAACC GGCAGGGCCA CAAGGGTTTC
TACATCGAAC CCACCGTGGT GGGCGGCCTG CGGCAGGACG ACCGGATGAT CCAGCAGGAG
ATCTTCGGTC CGGTCATCAC CGTGCAGAGC TTCTCCGACG AGGACGAGGC CGTCGCGTGG
GCCAACGGCG TCGAGTACGG GCTGGCCTCG TCGGTGTGGA CGAAGGACGT GTCACGCGCG
CTGCGGGTGT CGGCGGCCCT CGACTTCGGC TGCGTGTGGA TCAACACCCA CATCCCGCTC
GTCGCGGAGA TGCCGCACGG CGGCTTCAAG TCGTCGGGAC ACGGTAAGGA CCTGTCGATG
TACGGGCTGG AGGACTACAC CCGCATCAAG CACGTCATGG CCTACATCGG CTGA
|
|---|
| Protein sequence | MTTVKNFIGG ELVDSVSGAT MPLVDPSTGE EYGTAPVSNE ADIDNAYAAA SKAFKDWKRT
TPAQRQKALL DFADEVEKAA DDLVTAEGRN TGKPNHVTMA EEIPPMVDQI RFFAGAARVL
EGKSAGEYME NHTSWIRREP VGVIGQVAPW NYPMMMAIWK ICPAIAAGNT VVIKPSDTTP
VTTVMLAELA AKHLPPGVLN VVTGDRVTGA NLVAHPTPEM VAITGSVAAG RAVAVSAGGH
LKRTHLELGG KAPVIVFDDA DIAAAAEGIA TAGYFNAGQD CTAATRVLAP ARIASDLTDA
LAEQAKAATT TFGRPADDED AWVPPVNNVN QLDRVLGFFD DVPSHATVAV GGNRQGHKGF
YIEPTVVGGL RQDDRMIQQE IFGPVITVQS FSDEDEAVAW ANGVEYGLAS SVWTKDVSRA
LRVSAALDFG CVWINTHIPL VAEMPHGGFK SSGHGKDLSM YGLEDYTRIK HVMAYIG
|
|---|
| |