Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_2142 |
Symbol | |
ID | 4877862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 2240550 |
End bp | 2241377 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640139439 |
Product | extracellular solute-binding protein |
Protein accession | YP_001070419 |
Protein GI | 126434728 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.332487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00274771 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGTCCT TCTCGATGCT GTCTCGCAGG CGCGTCACGG CCGCCGTCGC GCTGGCGCTC GCTGTGCCGT TCGCGGCCAC CGCGTGCGGA GGTGGCGGCG GTGACGAGAA CACCATCGTC ATCGGCACGA AGTTCGACCA GCCGGGCCTG GGCCTGCGCA ACCCCGACGG TTCGATGAGC GGCTTCGACG TCGACGTCGC GACCTACGTG GCCGGCGAAC TGGGATACAC CCCCGAGCAG ATCGAGTGGA AGGAATCGCC GTCCGGACAG CGTGAGACGT TGATCCAGAA CGACCAGGTC GACTACATCG TGGCGACCTA TTCGATCACC GACTCCCGCA AGGAGAAGGT CGACTTCGCC GGGCCGTACC TGATCACCGG CCAGAGCCTG CTGGTGCGCA ACGACAACAC CGACATCACC GGCGCCGCGT CGCTGGCCAA CAACAAGCGG CTGTGCTCGG TGTCGGGTTC GACTCCCGCG CAGAAGATCA AGGACGAGTA CCCGGGTGTG CAGCTGCAGC AGTACGACAC CTACTCGGCG TGCATCGAGG CGCTGAAGAA CGGCGCCATC GACGCGGTCA CCACCGACGA GGTGATCCTG GCCGGTTACG CCGCGCAGAC CCCGGGCGCC TTCAAGATCG TCGGGGACAC GTTCTCCGAG GAGCGCTACG GCGTCGGGCT GAAGAAGGAC GACAGCGAAC TGCGGGCCAA GATCAACGCC GCGATCGAGA AGATGGAGTC CAGCGGCGCC TGGAAGGAAG CCTTCGACAA GAACCTCGGC CCGGCGGGTA TCACGGCGCC CACCCCGCCG CCGGTCGACA GCAACTGA
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Protein sequence | MPSFSMLSRR RVTAAVALAL AVPFAATACG GGGGDENTIV IGTKFDQPGL GLRNPDGSMS GFDVDVATYV AGELGYTPEQ IEWKESPSGQ RETLIQNDQV DYIVATYSIT DSRKEKVDFA GPYLITGQSL LVRNDNTDIT GAASLANNKR LCSVSGSTPA QKIKDEYPGV QLQQYDTYSA CIEALKNGAI DAVTTDEVIL AGYAAQTPGA FKIVGDTFSE ERYGVGLKKD DSELRAKINA AIEKMESSGA WKEAFDKNLG PAGITAPTPP PVDSN
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