Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_2027 |
Symbol | ispG |
ID | 4877748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 2134398 |
End bp | 2135579 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640139325 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_001070305 |
Protein GI | 126434614 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.873877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0985833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCCG GCCCCGCCAT CGGGCTTGGT ATGCCGCCCG CACCCCCGCC GGTGCTGGCA CCGCGGCGCA AGACCCGTCA GCTGATGGTG CGCGACGTCG GCGTGGGCAG CGATCATCCG ATCTCGGTCC AGTCCATGTG CACCACCAAG ACCCACGACA TCAACTCGAC CCTGCAGCAG ATCGCCGAAC TCACCGCGTC GGGCTGCGAC ATCGTCCGGG TGGCGTGCCC GCGGCAGGAG GACGCCGACG CGCTGCCGAT CATCGCCAAG AAGTCGAAGA TCCCGGTGAT CGCCGACATC CACTTCCAGC CGAAGTACAT CTTCGCCGCG ATCGACGCCG GATGTGCGGC GGTGCGCGTC AACCCCGGCA ACATCAAGGA GTTCGACGGT CGGGTCAAGG AGGTGGCCAA GGCCGCCGGT GACGCCGGCA TCCCGATCCG CATCGGCGTC AACGCCGGAT CGCTGGACAA GCGATTCCTG CAGAAGTACG GCAAGGCCAC GCCCGAGGCG CTCGTCGAGT CGGCGCTGTG GGAGGCCTCG CTGTTCGAGG AGCACGGCTT CGGCGACATC AAGATCAGCG TCAAGCACAA CGACCCCGTC GTGATGGTCG CGGCCTACGA GTTGCTGGCC GCCCGCAGCG ACTACCCGCT TCACCTCGGT GTCACCGAGG CCGGCCCGGC GTTCCAGGGG ACGATCAAGT CCGCGGTCGC CTTCGGCGCG TTGCTCTCCA AGGGCATCGG CGACACCATC CGGGTCTCGC TGTCCGCGCC GCCGGCCGAG GAGGTCAAGG TCGGCAACCA GATCCTCGAA TCGCTCAACC TGCGCCCGCG CGGTCTGGAG ATCGTGTCCT GCCCGTCGTG CGGACGCGCC CAGGTCGACG TGTACACCCT CGCCAACGAG GTCACCGCCG GCCTCGAGGG CATGGACGTC CCGTTGCGCG TCGCCGTCAT GGGCTGTGTC GTCAACGGTC CCGGCGAAGC CCGCGAAGCC GATCTCGGGG TGGCCTCCGG CAACGGCAAG GGTCAGATCT TCGTCAAGGG TGAGGTCATC AAGACCGTGC CCGAGGCGCA GATCGTCGAG ACGCTGATCG AGGAGGCCAT GCGCATCGCG GAGGAGATCG GCGCCGCCGG TGACAGCCCC GAGGGAAGTC CCAGCGGTTC GCCGGTTGTG ACCGTAAGCT GA
|
Protein sequence | MTSGPAIGLG MPPAPPPVLA PRRKTRQLMV RDVGVGSDHP ISVQSMCTTK THDINSTLQQ IAELTASGCD IVRVACPRQE DADALPIIAK KSKIPVIADI HFQPKYIFAA IDAGCAAVRV NPGNIKEFDG RVKEVAKAAG DAGIPIRIGV NAGSLDKRFL QKYGKATPEA LVESALWEAS LFEEHGFGDI KISVKHNDPV VMVAAYELLA ARSDYPLHLG VTEAGPAFQG TIKSAVAFGA LLSKGIGDTI RVSLSAPPAE EVKVGNQILE SLNLRPRGLE IVSCPSCGRA QVDVYTLANE VTAGLEGMDV PLRVAVMGCV VNGPGEAREA DLGVASGNGK GQIFVKGEVI KTVPEAQIVE TLIEEAMRIA EEIGAAGDSP EGSPSGSPVV TVS
|
| |