Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_2025 |
Symbol | |
ID | 4877746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 2132000 |
End bp | 2133178 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640139323 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_001070303 |
Protein GI | 126434612 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.376966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.146217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCACAA GACTTCGGGT GCTGATCCTG GGCAGTACCG GATCGATCGG CACCCAGGCG CTGGACGTGA TCGCCGCGAA CCCCGACCGC TTCGAGGTGG TCGGCCTGGC CGCCGGCGGG GCGAACCCCG AACTGCTGGC CCGTCAGCGC GCTGCGACCG GGGTGCACGC GATCGCCGTC ACCGACCCCG CGGCCGCCGA GAAGATCGGT GACGTGACCT ACAGCGGGCC CGATGCGGTG ACCCGCCTGG TCGAGAACAC GCAGGCCGAC GTGGTGCTCA ACGCCCTGGT GGGCGCGCTC GGGCTGGAGC CGACGCTGGC CGCCCTGGCG ACCGGTGCCC GGCTGGCGCT GGCCAACAAG GAATCCCTGG TCGCGGGCGG ACCGCTGGTG CTGCGGGCCG CCGCGCCGGG CCAGATCGTG CCGGTGGACT CCGAACACTC GGCCATGGCC CAGTGCCTGC GGGGCGGCAG CGCCGACGAA GTCGCCACGC TCGTACTCAC CGCGTCCGGC GGCCCGTTCC TCGGCTGGTC GGCCGAGGAT CTGCAGTCGG TCACCCCTGA GCAGGCGGGC AAACACCCGA CCTGGTCGAT GGGGCCGATG AACACGCTGA ACTCGGCGAC CCTGGTCAAC AAGGGGCTCG AGCTCATCGA GACGCACCTG CTGTTCGGCA TCGACTACGA CCGCATCGAG GTCGTCGTGC ACCCGCAGTC GATCGTGCAC TCGATGGCCA CCTTCACCGA CGGGTCGACG CTGGCCCAGG CCAGCCCGCC GGATATGAAG CTGCCGATCG CGCTGGCCCT CGGCTGGCCC GACCGGATCC CGGGCGCGGC GCTCGCCTGC GACTTCACCA CCGCGTCGAC CTGGGAGTTC CTGCCTCTCG ACGACGACGT GTTCCCGGCG GTGCGCCTGG CCAGGGAGGC CGGAAGGCGC GGCGGCAGCC TGACCGCGGT CTACAACGCC GCCAACGAGG AGGCGGCCGC GGCGTTCCTC GACGGCCGCA TCCGGTTCCC GCAGATCGTC GAGAGCGTGG CCGAGGTCCT GCGCGCTGCC GACCAGTGGG CCGCCGAACC AGCTACCGTG GAAGAGGTCC TCGACGCGCA GCGCTGGGCT CGGGATCGCG CCGGGCGTGC CGTCGAGCAC GCCGCCACAC CTCCGAGTAA AGGGTTAGTC ACCAGATGA
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Protein sequence | MGTRLRVLIL GSTGSIGTQA LDVIAANPDR FEVVGLAAGG ANPELLARQR AATGVHAIAV TDPAAAEKIG DVTYSGPDAV TRLVENTQAD VVLNALVGAL GLEPTLAALA TGARLALANK ESLVAGGPLV LRAAAPGQIV PVDSEHSAMA QCLRGGSADE VATLVLTASG GPFLGWSAED LQSVTPEQAG KHPTWSMGPM NTLNSATLVN KGLELIETHL LFGIDYDRIE VVVHPQSIVH SMATFTDGST LAQASPPDMK LPIALALGWP DRIPGAALAC DFTTASTWEF LPLDDDVFPA VRLAREAGRR GGSLTAVYNA ANEEAAAAFL DGRIRFPQIV ESVAEVLRAA DQWAAEPATV EEVLDAQRWA RDRAGRAVEH AATPPSKGLV TR
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