Gene Mjls_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2023 
Symbol 
ID4877744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2130428 
End bp2131021 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content68% 
IMG OID640139321 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_001070301 
Protein GI126434610 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.113432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA ACATCAATCG AGTACTGGGC GCAGGCTTCG CGGCGGTCGC CGCCGCAGGG 
TTGTCGCTCG GCGTCGCCGC CACCGCCCAG GCGCAGCCGG CGACCGGACT GGTCGGCCCC
GGTTGCACCG CCTACGCCCA GCAGGTGCCG CAGGGTCCGG GCTCGGTCGC GGGCATGGCG
ATGGATCCGG TCGCGACGGC CGCGTCCAAC AACCCGCTGC TGACCACCCT CACCAAAGCT
GTTTCAGGCC AACTGAATCC GCAGGTGAAC CTGGTCGAGA CCCTCAACGG GGGCGAGTTC
ACGGTGTTCG CGCCCACCGA TGAGGCGTTC GCGAAGATCG ATCCCGCCAC CATCGAGCGG
CTCAAGACCG ATGCGCCGCT GCTGACCAGC ATCCTCACCT ACCACGTGGT GCCGGGACAG
GCCGGTCCGG ACGCGGTCGT CGGCACGCAC AAGACGGTGC AGGGTGCGGA CGTCAACGTC
ACCCACGGTG CGGAGTTGAA GGTCAACGAC GCCTCCGTGG TGTGCGGTGG GGTGAAGACC
GCCAACGCCA CCGTGTACCT CATCGACACG GTGTTGATGC CGCCCGCCAA CTGA
 
Protein sequence
MNININRVLG AGFAAVAAAG LSLGVAATAQ AQPATGLVGP GCTAYAQQVP QGPGSVAGMA 
MDPVATAASN NPLLTTLTKA VSGQLNPQVN LVETLNGGEF TVFAPTDEAF AKIDPATIER
LKTDAPLLTS ILTYHVVPGQ AGPDAVVGTH KTVQGADVNV THGAELKVND ASVVCGGVKT
ANATVYLIDT VLMPPAN