Gene Mjls_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1889 
Symbol 
ID4877611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1993603 
End bp1995033 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content73% 
IMG OID640139186 
Producthypothetical protein 
Protein accessionYP_001070168 
Protein GI126434477 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.247314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.163069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTCA CTGTCGTCGG CAGCGGCCCC AACGGCCTGG CCGCCGCGGT CATCTGCGCC 
CGTGCGGGTC TGTCGGTGCG GGTGATCGAG GGTCAGCCCA CGCCGGGCGG CGGTGCGCGC
AGCGCTGCCG ACCCCGAGTT CCCGGACGTT CTGCACGACG TGTGCTCGGC GGTGCATCCG
CTGTCCGTGG CGTCGCCGTT TTTCGCGGAG TTCGATCTCG CGGCGCGCGG CGTGGACCTG
ATCTCACCGG AGGTGTCCTA CGCCAACCCG CTGCCCGGCC GGCCGGCGGC CGTCGCGTAC
CGGTCGCTGG ACCGGACGTG CGCCGAACTC GACCACGGTG AGTCGTGGCG GCGGTTGTTC
GGGCCGTTGG TCGAGCACGT CGACGGTGTG CTCGGCTTCT TCCTCGGCGA CAAACGGTCG
CTGCCGCCGG ATCTCCCGAC GACGGTGCGC ACCGGCCTGC GGGTGCTGGC CCAGGGCAGC
CCGTTGTGGG GGTCGCTGCG GGGTGAGGAC GCCAGGGCGC TGTTCACCGG TGTCGGCGTA
CACGCCATCA AGGCCATTCC CTCCCCGGTG AACAGCGGTG CGGGCCTGAT GCTCGGCACG
GTCGCGCACA CCGCGGGGTG GCCGGTCCCC GTCGGGGGCA CGCAACGGAT CTCCGATGCG
CTGATCGCCG ATCTCCAGGC GCACGGCGGC GAACTGGTGC TCGGCGAACC CGTCACCGCA
CCCCCGGCCG GGGTGACCCT CTACGACACC GCGCCCACCG CACTACTGGC GATCTACGGC
GACGCGGTAC CGCCGCGCTA CGCACGGGCC CTGCGCCACT ACCGGTACGG CCCCGGGGTC
TGCAAGGTCG ACTTCGTCCT GTCCGGTGAG ATCCCGTGGC GCGACCCGCG GGTCCGCGAT
GCGGTCACCG TGCACATGGG CGGCAGCCGC GCGCAGATGG CGCTCGCCGA ACGCGACGTC
GCCGCGGGCC GGCACGCCGA GTGGCCGATG GTGCTGGCGT CGCTCCCCCA CCTGGCGGAT
CCGTCACGCA TCGACGCCCA GGGGCGCCGC CCGCTGTGGA CCTACGCGCA CGTGCCGTCG
GGCTCGGACG CCGACCTCAC CGAGACGGTG ACCGCCATGT TCGAACGCGC GGCGCCGGGT
TTCCGCGATC TGGTCGTCGG CGCCCGGTGC GTACCGGCGG CGCAGATGTC GCTGCACAAC
GCGAATTACG TCGGCGGCGA CATCATCGTC GGCGGGGCGA CGCTGTTCGC CGCGATGGTC
GGACCGACGT TGCGGCTCGA CCCGTGGACC ACCCCGATCC CCGGGGCGTA CCTGTGCTCG
TCGGCCACCC CGCCCGGCAC CGGTGTGCAC GGGATGGCCG GCTACTACGC GGCGCGCACG
ATGCTGCGCC GCGAATTCGG CATCGAAAAG CTGCCGAGCC TGGTCCCCTG A
 
Protein sequence
MDVTVVGSGP NGLAAAVICA RAGLSVRVIE GQPTPGGGAR SAADPEFPDV LHDVCSAVHP 
LSVASPFFAE FDLAARGVDL ISPEVSYANP LPGRPAAVAY RSLDRTCAEL DHGESWRRLF
GPLVEHVDGV LGFFLGDKRS LPPDLPTTVR TGLRVLAQGS PLWGSLRGED ARALFTGVGV
HAIKAIPSPV NSGAGLMLGT VAHTAGWPVP VGGTQRISDA LIADLQAHGG ELVLGEPVTA
PPAGVTLYDT APTALLAIYG DAVPPRYARA LRHYRYGPGV CKVDFVLSGE IPWRDPRVRD
AVTVHMGGSR AQMALAERDV AAGRHAEWPM VLASLPHLAD PSRIDAQGRR PLWTYAHVPS
GSDADLTETV TAMFERAAPG FRDLVVGARC VPAAQMSLHN ANYVGGDIIV GGATLFAAMV
GPTLRLDPWT TPIPGAYLCS SATPPGTGVH GMAGYYAART MLRREFGIEK LPSLVP