Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1741 |
Symbol | |
ID | 4877465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 1838224 |
End bp | 1838892 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640139040 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001070022 |
Protein GI | 126434331 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00122783 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCC CCGATTTCGC GGCCCGCCCC CAGCTCTCGG AGGACGTCGC GCGGTTCGTC CGTCGGCGCA TCTTCGACGG CACCTACCCG GCCGGTGGGT ACATCCGGCT CGAACAGCTG GCCTCCGAGC TGGGCGTCAG CGTGACACCG GTGCGCGAGG CGCTGTTCGG GTTGCGCGCC GAAGGGCTTC TCGCACAACA GCCCCGGCGC GGATTCGTCG TGCTGCCGGT CACGGGTCGC GACATCGCCG ACGTGTCGAA CGTGCAGGCG TACGTCGGCG GCGAGCTGGC CGCCCGCGCG GCGCACAACA TCACCGACGA TCAGCTGCGT GAACTCACCG CGATCCAGGA TGCGCTGGAG GACGCCTACC GGCGCGACGA CGGCGAAGGC GCGGTGCGGC TCAACCACGA GTTCCACCGG GCGATCAACG TCGCGGCCGA CTCACCGAAG CTCGCCCAGA TGATGTCGCT GATCACCCGG TACGCGCCGG AGTCGGTGTT CCCCACGATC GAGCGCTGGC CCGCCGAGTC GGTGCGTCAC CACCGGCAGT TGCTGACCGC GCTGGCGCAG CGTGACGACG CCCTGGCGCG GTCGGCGATG TCGGAGCACC TCGCGGCGGG CGCCGAACCG CTCATCGAGC ACCTCAAGAC CCGCGGCGTG GTCCAGTGA
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Protein sequence | MSAPDFAARP QLSEDVARFV RRRIFDGTYP AGGYIRLEQL ASELGVSVTP VREALFGLRA EGLLAQQPRR GFVVLPVTGR DIADVSNVQA YVGGELAARA AHNITDDQLR ELTAIQDALE DAYRRDDGEG AVRLNHEFHR AINVAADSPK LAQMMSLITR YAPESVFPTI ERWPAESVRH HRQLLTALAQ RDDALARSAM SEHLAAGAEP LIEHLKTRGV VQ
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