Gene Mjls_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1413 
Symbol 
ID4877149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1515694 
End bp1516407 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID640138721 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001069706 
Protein GI126434015 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.491366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAACGG CCTGCCTGGA TCGTCCGGTG GATCTGCCGG GCCTGTTCGA CGGCGCCGCG 
ACAGAAGGGA CGGTGTCGAC CACGATGACC GACATCGACG GTGCGGCGGC CGAACGACAG
GAAACCGACG CCGAACTGAC GGCGCGTTTC GAGCGCGATG CGATACCGCT GCTCGACCAG
CTCTACGGCG GCGCGCTGCG CATGACGCGC AATCCCGCCG ACGCCGAGGA TCTGCTGCAG
GAGACGATGG TCAAGGCCTA TGCCGGGTTC CGGTCGTTTC GTGAGGGCAC CAACCTCAAG
GCGTGGCTGT ACCGCATCCT GACCAACACC TACATCAACA GCTACCGCAA GAAGCAGCGC
CAGCCGTCGG AGTACCCCAC CGAGGAGATC ACGGACTGGC AGCTCGCCGC GAACGCCGAG
CATTCGTCGA CGGGGCTGCG GTCTGCCGAG GTCGAGGCGC TCGAATCGCT GCCCGACACG
GAGATCAAGG CGGCGTTGCA GGCGCTACCG GAGGATTTCC GGATGGCGGT CTACTACGCC
GACGTCGAAG GATTCCCGTA CAAGGAGATC GCGGAGATCA TGGATACGCC CATCGGGACC
GTGATGTCCC GGTTGCATCG TGGCCGCAAG CAGCTTCGTG AGCTGCTCGC CGATGTCGCC
CGAGACCGCG GGTTCCTCCG CGGTGCGCAA GCGCCCGAGG AGGTGTCGTC GTGA
 
Protein sequence
MPTACLDRPV DLPGLFDGAA TEGTVSTTMT DIDGAAAERQ ETDAELTARF ERDAIPLLDQ 
LYGGALRMTR NPADAEDLLQ ETMVKAYAGF RSFREGTNLK AWLYRILTNT YINSYRKKQR
QPSEYPTEEI TDWQLAANAE HSSTGLRSAE VEALESLPDT EIKAALQALP EDFRMAVYYA
DVEGFPYKEI AEIMDTPIGT VMSRLHRGRK QLRELLADVA RDRGFLRGAQ APEEVSS