Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1310 |
Symbol | |
ID | 4877046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 1403422 |
End bp | 1404213 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640138618 |
Product | RNA polymerase sigma factor SigF |
Protein accession | YP_001069603 |
Protein GI | 126433912 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCCAT CGTCGGCACA GGGTTCGTCG CCACGACAGA ACTCTGAGTA CTCGGACGTG GCCCCCATGT TCCGGGAACT TCAGGGGCTC ACCCCGAGCA CACCTCAGTT CCAGCGTCAG CGCGACCGGA TCGTCGAACG CTGCCTCCCG CTTGCCGATC ACATCGCCCG TCGCTTCGAC GGCCGCGGCG AGCCGCGCGA CGACCTCGTC CAGGTCGCCC GGGTCGGCCT GGTCAACGCG GTGATCCGCT TCGACGTCGA CGCCGGATCG GATTTCGTGT CGTTCGCGGT GCCCACCATC ATGGGTGAGG TCCGGCGGCA CTTCCGGGAC AACAGCTGGT CGGTCAAGGT GCCCCGCCGG CTCAAGGAAC TGCACCTGCG CCTCGGGTCG GCGACCGCCG AACTGTCCCA GCGCCTCGGC CGCGCGCCGA CGGCCAGCGA GCTCGCCGAG GAACTCGGCA TGGACCGCGA CGAGGTGGTC GAGGGCCTGG TCGCAGGCAG TTCCTACAAC ACCCTGTCGA TCGACAGCGG CGGCAACAGC GGTAACGAGG ATGCGCCCGC GATCGCCGAC ACCCTCGGCG ATGTGGACCT GGGTCTCGAT CAGATCGAGA ACCGCGAGGC ACTGCGACCG CTGCTGGCCG CGCTTCCGGA GCGCGAGCGC ATGGTCCTGC TGCTGCGGTT CTTCGAGAAC CTCACCCAGA CCCAGATCGC CGAACGGGTC GGCATCTCGC AGATGCACGT GTCCAGGCTG CTGGCCAAAT CGCTAACGCG GCTCCGCGAC CAGTTGCAGT AG
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Protein sequence | MTPSSAQGSS PRQNSEYSDV APMFRELQGL TPSTPQFQRQ RDRIVERCLP LADHIARRFD GRGEPRDDLV QVARVGLVNA VIRFDVDAGS DFVSFAVPTI MGEVRRHFRD NSWSVKVPRR LKELHLRLGS ATAELSQRLG RAPTASELAE ELGMDRDEVV EGLVAGSSYN TLSIDSGGNS GNEDAPAIAD TLGDVDLGLD QIENREALRP LLAALPERER MVLLLRFFEN LTQTQIAERV GISQMHVSRL LAKSLTRLRD QLQ
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