Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1141 |
Symbol | rpsD |
ID | 4876878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 1218206 |
End bp | 1218811 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640138450 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_001069435 |
Protein GI | 126433744 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.273227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGTT ACACCGGACC CGCCACCCGC AAGTCGCGCC GCCTCGGCGT CGACCTCGTC GGTGGTGATC AGTCGTTCGA GAAGCGCCCC TACCCGCCCG GCCAGCACGG TCGCGCGCGG ATCAAGGAGA GCGAATACCG CACCCAGCTG CAGGAGAAGC AGAAGGCCCG CTTCACCTAC GGCGTGCTGG AGAAGCAGTT CCGTCGCTAC TACGACGAGG CCAACCGGCA GCCCGGCAAG ACCGGCGACA ACCTGCTGCG CATCCTCGAG AGCCGGCTGG ACAACGTCGT GTACCGCGCC GGCCTGGCGC GCACCCGCCG GATGGCCCGC CAGCTCGTCA GCCACGGCCA CTTCACCGTC AACGGCGTCA AGGTCGACAT CCCCAGCTAC CGGGTGTCGC AGTACGACAT CATCGACGTG CGCGAGAAGT CGCTGAACAC CGATCCGTTC GTGATCGCGC GGGAGACCGC GGGTGACCGG CCGATCCCGT CGTGGCTGCA GGTCGTCGGC GAACGTCAGC GCATCCTCGT CCACCAGTTG CCGGAGCGCG CGCAGATCGA CGTGCCGCTC ACCGAGCAGC TGATCGTCGA GCTCTACTCG AAGTAA
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Protein sequence | MARYTGPATR KSRRLGVDLV GGDQSFEKRP YPPGQHGRAR IKESEYRTQL QEKQKARFTY GVLEKQFRRY YDEANRQPGK TGDNLLRILE SRLDNVVYRA GLARTRRMAR QLVSHGHFTV NGVKVDIPSY RVSQYDIIDV REKSLNTDPF VIARETAGDR PIPSWLQVVG ERQRILVHQL PERAQIDVPL TEQLIVELYS K
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