| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1077 |
|---|
| Symbol | |
|---|
| ID | 4876817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1156302 |
|---|
| End bp | 1156802 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640138390 |
|---|
| Product | RNA polymerase sigma factor SigL |
|---|
| Protein accession | YP_001069375 |
|---|
| Protein GI | 126433684 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.829814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATC CGGAAGCCAC GATGATGCGC GTGCTCTACG ACGAGCACGC CGATGCATTG
TGGCGGTACG CGCTCCAACT GACCGGTGAC GCCGCCACCG CCGAGGATGT CGTCCAGGAG
ACGCTGCTGC GGGCATGGCG GCACCGGCCG AACGGGTCGG CGCGGGCCTG GTTGTTCACC
GTGGCCCGCA ATCTGGTGAT CGACGAGCGG CGCAGCGCGC GCTACCGCCG CGAGGCCGGG
ACCCCGGACG TCGAAACCGT GGCGCAGCCC AGCGAACCGG ACAAGGTGGA CTCCGCGCTG
GACCGGATGC TCATCGGCTC GGCGCTCGCA CAGTTGTCCG AGGACCACCG GGCGGTCGTC
CGGCGCGCGT ACTACCAGGG GTGGACGACG GGGCAGATCG CGGCCGAACT CGAGATCCCG
GAGGGGACCG TGAAGTCCCG GCTGCACTAC GCCGTGCGGG CGTTGCGACT GAACCTGCAG
GAGATGGGGG TGACGCGATG A
|
|---|
| Protein sequence | MDDPEATMMR VLYDEHADAL WRYALQLTGD AATAEDVVQE TLLRAWRHRP NGSARAWLFT
VARNLVIDER RSARYRREAG TPDVETVAQP SEPDKVDSAL DRMLIGSALA QLSEDHRAVV
RRAYYQGWTT GQIAAELEIP EGTVKSRLHY AVRALRLNLQ EMGVTR
|
|---|
| |