| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1005 |
|---|
| Symbol | |
|---|
| ID | 4876746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1095014 |
|---|
| End bp | 1095745 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640138319 |
|---|
| Product | PaaX domain-containing protein, C- domain |
|---|
| Protein accession | YP_001069304 |
|---|
| Protein GI | 126433613 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.457167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTTGA CGGCGCGGTC GGTGGTGCTG TCGGTCCTGC TCGGTGCGCA TCCGGCCTGG
GCCACCGCGA GCGAATTGAT CCGCCTCACC GCCGATTTCG ACATCCGCGA ACCGACCGTG
CGGGTGGCGC TGACGCGGAT GGTCGGCGCG GGCGACCTGG TCCGCTCGGC CGACGGCTAC
CGGCTGTCGG ACCGGCTGCT GGCCCGGCAG CGCCGCCAGG ACGACGCGAT CAACCCGCGG
CCGCGCCGGT GGGACGGCAC CTGGACCACC CTGGTGATCA CCAGCGTCGG CACCGACGCC
CGCACCCGCG CGGCCCTGCG GAACACACTG CAGGACAACC GCTTCGGTGA ACTGCGCGAA
GGGGTGTGGC TGCGGCCCGA CAACCTCGAC ACGGCGTTGC CCGAGGACGT CGCCGACCGG
GTGCGGGTGC TGCACGCCCG CGACGACGAA CCGGCAGACC TCGCCGCCCG GCTGTGGGAC
CTGCCCGCGT GGGCGGCGCA GGGCCGTCGG CTCCTCGACG ACATGGACAC CGCCCGCGAC
ATCCCCGCCC GGTTCGTCAC CGCCGCCGCG ATCGTCCGGC ACCTGCTCAC CGATCCCGTG
CTGCCCGCCG ACCTGCTGCC CGCGGACTGG CCCGGCGACG AATTACGCAC CGCCTACACC
GCTTTCGCCG CCGAACTCGT CGAGCGGCGC GATGCCCAAC TCAGAGACGC CCAACTCATG
GAGGCGACAT GA
|
|---|
| Protein sequence | MRLTARSVVL SVLLGAHPAW ATASELIRLT ADFDIREPTV RVALTRMVGA GDLVRSADGY
RLSDRLLARQ RRQDDAINPR PRRWDGTWTT LVITSVGTDA RTRAALRNTL QDNRFGELRE
GVWLRPDNLD TALPEDVADR VRVLHARDDE PADLAARLWD LPAWAAQGRR LLDDMDTARD
IPARFVTAAA IVRHLLTDPV LPADLLPADW PGDELRTAYT AFAAELVERR DAQLRDAQLM
EAT
|
|---|
| |